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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310

Search features with annotation key words

Displaying items 31-60 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_31
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(32527..35091)
DNA (2565bp) protein (855aa)
putative penicillin-binding protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
putative penicillin-binding protein id=5803206 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
putative penicillin-binding protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_32
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(35143..35337)
DNA (195bp) protein (65aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_33
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(35423..35908)
DNA (486bp) protein (162aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC id=1968306 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_34
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(35905..36450)
DNA (546bp) protein (182aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Probable transcriptional regulatory protein THEYE_A1868 id=1702956 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_35
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(36529..37035)
DNA (507bp) protein (169aa)
hypothetical protein
Putative uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Putative uncharacterized protein id=2934364 bin=GWC1_OD1_38_17 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_36
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(37032..37253)
DNA (222bp) protein (74aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_37
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(37260..38297)
DNA (1038bp) protein (346aa)
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY80_9BACT
Holliday junction DNA helicase RuvB
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_38
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(38541..40214)
DNA (1674bp) protein (558aa)
type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
pilB1; type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB id=5803215 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type IV-A pilus assembly ATPase PilB
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_39
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(40229..41074)
DNA (846bp) protein (282aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_40
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

41125..41718
DNA (594bp) protein (198aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_41
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

41815..42273
DNA (459bp) protein (153aa)
hypothetical protein; K06925 UPF0079 ATP-binding protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Putative uncharacterized protein id=2966082 bin=GWA1_ZB2_49_26 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
ATP/GTP hydrolase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_42
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

42266..44890
DNA (2625bp) protein (875aa)
polA; DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
DNA polymerase id=2934196 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
polA; DNA polymerase I
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_43
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

44904..46115
DNA (1212bp) protein (404aa)
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Sensor protein resE id=2720430 bin=GWA1_ZB2_49_26 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
integral membrane sensor signal transduction histidine kinase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_44
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

46247..46708
DNA (462bp) protein (154aa)
response regulator receiver protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain id=2966073 bin=GWA1_ZB2_49_26 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
response regulator receiver protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_45
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

46822..47586
DNA (765bp) protein (255aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_46
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(47598..47861)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000371EFDE
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
30S ribosomal protein S20
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_47
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(48025..50007)
DNA (1983bp) protein (661aa)
UvrABC system protein B n=1 Tax=Geobacillus sp. (strain C56-T3) RepID=D7D3W1_GEOSC
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
excinuclease ABC subunit B
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_48
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

50057..50644
DNA (588bp) protein (196aa)
Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Holliday junction ATP-dependent DNA helicase RuvA id=3305459 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
Holliday junction DNA helicase RuvA
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_49
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

50742..50903
DNA (162bp) protein (54aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_50
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

50893..52161
DNA (1269bp) protein (423aa)
Replication-associated recombination protein A n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ00_9BACT
rarA; replication-associated recombination protein A; K07478 putative ATPase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
rarA; replication-associated recombination protein A
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_51
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

52158..52634
DNA (477bp) protein (159aa)
tRNA/rRNA methyltransferase SpoU Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
tRNA/rRNA methyltransferase (SpoU) id=8333 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
tRNA/rRNA methyltransferase SpoU
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_52
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

52647..52805
DNA (159bp) protein (53aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_53
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

52840..53508
DNA (669bp) protein (223aa)
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
alpha/beta-Hydrolases id=133426 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_54
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

53564..54367
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000377A96F
hypothetical protein; K06877 DEAD/DEAH box helicase domain-containing protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_55
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

54342..54860
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L4T1_9BACT
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_56
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

55173..55667
DNA (495bp) protein (165aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_57
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(56351..56515)
DNA (165bp) protein (55aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_58
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(56718..57203)
DNA (486bp) protein (162aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
heat shock protein Hsp20; K13993 HSP20 family protein id=5803649 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Small heat shock protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_59
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(57244..58041)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003801EA9
membrane protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
peptidase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_60
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(58029..60122)
DNA (2094bp) protein (698aa)
valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000369942C
valyl-tRNA synthetase
Displaying items 31-60 of 73 in total

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