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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_1
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(544..1698)
DNA (1155bp) protein (385aa)
Putative Na(+)/H(+) antiporter n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6XDG4_9MICO
Putative Na(+)/H(+) antiporter Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_2
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(1907..2884)
DNA (978bp) protein (326aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_3
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(2894..4162)
DNA (1269bp) protein (423aa)
Band 7 protein n=1 Tax=Clostridium sp. CAG:793 RepID=R5N653_9CLOT
band 7 protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
band 7 protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_4
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(4304..5188)
DNA (885bp) protein (295aa)
putative Tyrosine recombinase xerD Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
tyrosine recombinase XerD; K04763 integrase/recombinase XerD id=88450 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
putative Tyrosine recombinase xerD
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_5
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


5381..5647
DNA (267bp) protein (89aa)
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
30S ribosomal protein S15 id=4731964 bin=GWC2_OD1_43_27 species=Coprococcus comes genus=Coprococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
rpsO; 30S ribosomal protein S15
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_6
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

5647..6162
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035CE5CA
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_7
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

6179..8359
DNA (2181bp) protein (727aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036D677E
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_8
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

8313..9218
DNA (906bp) protein (302aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_9
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

9322..9678
DNA (357bp) protein (119aa)
DnaK suppressor protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
TraR/DksA family transcriptional regulator id=5803180 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DnaK suppressor protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_10
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

9776..11317
DNA (1542bp) protein (514aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI00037C2A30
Mg chelatase-like protein; K07391 magnesium chelatase family protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Mg chelatase-like protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_11
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(11357..12460)
DNA (1104bp) protein (368aa)
peptidase M23 family protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
peptidase M23 family protein id=5803183 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M23 family protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_12
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

12584..14554
DNA (1971bp) protein (657aa)
UvrD; superfamily I DNA/RNA helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
ATP-dependent DNA helicase PcrA id=3072116 bin=GWC1_TM7_41_48 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_TM7_41_48 organism_group=TM7
UvrD/REP helicase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_13
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


14645..15502
DNA (858bp) protein (286aa)
rsmA; ribosomal RNA small subunit methyltransferase A (EC:2.1.1.182) Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] id=5803185 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rsmA; ribosomal RNA small subunit methyltransferase A (EC:2.1.1.182)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_14
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

15648..16604
DNA (957bp) protein (319aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_15
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

16613..17833
DNA (1221bp) protein (407aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_16
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

17793..20243
DNA (2451bp) protein (817aa)
id=4731923 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
id=4731923 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_17
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

20255..21175
DNA (921bp) protein (307aa)
seg Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
seg id=5803190 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_18
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

21242..21661
DNA (420bp) protein (140aa)
seg Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
seg id=5803192 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_19
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

21679..22398
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000376DC51
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_20
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

22376..24205
DNA (1830bp) protein (610aa)
Type IV secretory pathway VirB4 components-like protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
type IV secretory pathway VirB4 components-like protein id=5803195 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Type IV secretory pathway VirB4 components-like protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_21
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

24212..24997
DNA (786bp) protein (262aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_22
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

25005..26078
DNA (1074bp) protein (358aa)
seg Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
seg id=5803196 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_23
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

26068..26490
DNA (423bp) protein (141aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2CB99_9BACT
Uncharacterized protein (Fragment) Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_24
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

26506..27675
DNA (1170bp) protein (390aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_25
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(27755..28249)
DNA (495bp) protein (165aa)
single-stranded nucleic acid-binding R3H domain-containing protein; K06346 spoIIIJ-associated protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
R3H domain protein id=1968368 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
single-stranded nucleic acid binding R3H domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_26
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(28212..28955)
DNA (744bp) protein (248aa)
putative 60 kDa inner membrane insertion protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
60 kDa inner membrane insertion protein; K03217 preprotein translocase subunit YidC id=5803200 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
60 kDa inner membrane insertion protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_27
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(28957..29304)
DNA (348bp) protein (116aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_28
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

29605..30966
DNA (1362bp) protein (454aa)
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Chromosomal replication initiator protein DnaA id=4731911 bin=GWC2_OD1_43_27 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
chromosomal replication initiator protein DnaA
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_29
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

31142..32251
DNA (1110bp) protein (370aa)
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta id=2934338 bin=GWC1_OD1_38_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_310_30
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

32253..32546
DNA (294bp) protein (98aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Displaying items 1-30 of 73 in total

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