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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_1
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

2..682
DNA (681bp) protein (227aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_2
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

691..1056
DNA (366bp) protein (122aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_3
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(1137..1358)
DNA (222bp) protein (74aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_4
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(1640..2389)
DNA (750bp) protein (250aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_5
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(2462..3925)
DNA (1464bp) protein (488aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000365DF08
ComEC/Rec2-like protein; K02238 competence protein ComEC Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
ComEC/Rec2-like protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_6
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

4033..4179
DNA (147bp) protein (49aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_7
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(4450..4551)
DNA (102bp) protein (34aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_8
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(4690..4932)
DNA (243bp) protein (81aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_9
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

5161..7026
DNA (1866bp) protein (622aa)
Subtilisin-like serine protease n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L2B9_METHD
subtilisin-like serine protease Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
subtilisin-like serine protease
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_10
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(7554..7841)
DNA (288bp) protein (96aa)
acylphosphatase (EC:3.6.1.7); K01512 acylphosphatase [EC:3.6.1.7] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
acylphosphatase (EC:3.6.1.7)
Acylphosphatase n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U9A1_DEIML
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_11
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

8118..8390
DNA (273bp) protein (91aa)
hup; DNA-binding protein Hup Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
nucleoid DNA-binding protein HU-beta; K03530 DNA-binding protein HU-beta id=5803144 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hup; DNA-binding protein Hup
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_12
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(8487..10019)
DNA (1533bp) protein (511aa)
HDIG/KH domain-containing protein; K06950 uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
phosphodiesterase; K06950 uncharacterized protein id=5803143 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
HDIG/KH domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_13
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

10322..11908
DNA (1587bp) protein (529aa)
phosphoglycerate mutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
sti:Sthe_1664 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (EC:5.4.2.1); K01834 phosphoglycerate mutase [EC:5.4.2.1] id=89151 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
phosphoglycerate mutase (EC:5.4.2.1)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_14
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(12053..12637)
DNA (585bp) protein (195aa)
clpP2; ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92) Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] id=133848 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
clpP2; ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_15
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(12705..13724)
DNA (1020bp) protein (340aa)
trigger factor; K03545 trigger factor Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Trigger factor id=3486010 bin=GWA1_ZB2_49_26 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
trigger factor
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_16
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(13724..15703)
DNA (1980bp) protein (660aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump id=1921122 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_17
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(15729..17033)
DNA (1305bp) protein (435aa)
NusA antitermination factor; K02600 N utilization substance protein A Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Transcription termination factor NusA id=4621407 bin=GWA2_CPR4_42_17 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
NusA antitermination factor
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_18
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

17230..18189
DNA (960bp) protein (320aa)
multi-sensor signal transduction histidine kinase; K07652 two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003804C61
Sensor protein resE
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_19
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

18230..18595
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035E4390
two component transcriptional regulator, winged helix family; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230
two component transcriptional regulator, winged helix family
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_20
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

18592..20358
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035E2C1A
Type II secretion system protein E Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
secretion system protein E
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_21
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

20458..21699
DNA (1242bp) protein (414aa)
type II secretion system F domain-containing protein; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC id=5803123 bin=OD1_GWC2_34_28 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type II secretion system F domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_22
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

21712..22254
DNA (543bp) protein (181aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_23
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

22296..22835
DNA (540bp) protein (180aa)
transmembrane_regions Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
transmembrane_regions id=5227506 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_24
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

22838..23470
DNA (633bp) protein (211aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_25
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

23484..25694
DNA (2211bp) protein (737aa)
seg Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
seg id=5803119 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_26
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

25712..26791
DNA (1080bp) protein (360aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Type IV pilus assembly protein PilM id=5227483 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
fimbrial assembly membrane protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_27
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

26800..27330
DNA (531bp) protein (177aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_28
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

27334..27864
DNA (531bp) protein (177aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_29
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

27861..28181
DNA (321bp) protein (107aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_1850_30
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

28462..28974
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YJS6_9BRAD
Putative uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Displaying items 1-30 of 35 in total

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