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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_34958

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_34958_1
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

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comp(117..992)
DNA (876bp) protein (292aa)
Integrase catalytic region n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S091_DESTD
integrase catalytic subunit Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
integrase catalytic subunit
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_34958_2
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

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comp(1144..1551)
DNA (408bp) protein (136aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_34958_3
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

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1588..1785
DNA (198bp) protein (66aa)
XRE family transcriptional regulator Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Transcriptional regulator, XRE family id=3506444 bin=GWC1_OD1_38_17 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
regulatory protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_34958_4
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

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1791..2795
DNA (1005bp) protein (335aa)
peptidase U61 LD-carboxypeptidase A Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Putative MccF-like protein (Microcin C7 resistance) id=2739747 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
peptidase U61 LD-carboxypeptidase A
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_34958_5
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

2801..3544
DNA (744bp) protein (248aa)
Orn/DAP/Arg decarboxylase 2; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Orn/DAP/Arg decarboxylase 2 id=2684322 bin=GWF1_Spirochaetes_51_8 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
Orn/DAP/Arg decarboxylase 2
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_34958_6
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

3549..5399
DNA (1851bp) protein (617aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003773806
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_34958_7
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

5683..6027
DNA (345bp) protein (115aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein id=16962 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_34958_8
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(6176..6508)
DNA (333bp) protein (111aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_34958_9
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(6569..6943)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00038149AA
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_34958_10
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

7455..7610
DNA (156bp) protein (52aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Displaying 10 items

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