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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_1
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(2..649)
DNA (648bp) protein (216aa)
tRNA nucleotidyltransferase/poly(A) polymerase family protein; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2EIQ2_9BACT
tRNA nucleotidyltransferase/poly(A) polymerase family protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_2
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(746..2233)
DNA (1488bp) protein (496aa)
recombinase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
recombinase
recombinase id=5093103 bin=PER_GWE2_39_6 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_3
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(2230..2553)
DNA (324bp) protein (108aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_4
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(2567..3364)
DNA (798bp) protein (266aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_5
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

3700..4242
DNA (543bp) protein (181aa)
general secretion pathway protein G; K02456 general secretion pathway protein G Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Pilus assembly protein id=2052378 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
general secretion pathway protein G
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_6
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

4274..4531
DNA (258bp) protein (86aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_7
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(4741..4875)
DNA (135bp) protein (45aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_8
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

4909..5601
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HFQ3_9PROT
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_9
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

5607..6710
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TP66_METAC
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_10
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

6722..7276
DNA (555bp) protein (185aa)
Putative membrane-anchored protein n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BIP1_RHILV
GDYXXLXY domain-containing protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
GDYXXLXY domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_11
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(7502..7834)
DNA (333bp) protein (111aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_12
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(7850..9370)
DNA (1521bp) protein (507aa)
Translation initiation factor IF-2 protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0D5_9BACT
infB; translation initiation factor if-2; K02519 translation initiation factor IF-2 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
infB; Translation initiation factor IF-2
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_13
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(9495..9989)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037EBD53
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_14
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

10266..10517
DNA (252bp) protein (84aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_15
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(10620..11195)
DNA (576bp) protein (192aa)
manganese and iron superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
superoxide dismutase n=1 Tax=unclassified candidate division EM 19 RepID=UPI0003B535FC
manganese and iron superoxide dismutase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_16
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(11282..11845)
DNA (564bp) protein (188aa)
prx2-1; 2-cysteine peroxiredoxin (EC:1.11.1.15); K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
prx2-1; 2-cysteine peroxiredoxin (EC:1.11.1.15)
2-cysteine peroxiredoxin n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W592_UNCMA
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_17
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(11986..12402)
DNA (417bp) protein (139aa)
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
heat shock protein Hsp20; K13993 HSP20 family protein id=15190193 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
heat shock protein Hsp20
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_18
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(12488..12994)
DNA (507bp) protein (169aa)
NUDIX hydrolase n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VCN1_9CYAN
NUDIX hydrolase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
NUDIX hydrolase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_19
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

13100..13903
DNA (804bp) protein (268aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7UTA8_9DELT
molybdopterin biosynthesis MoeB protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
molybdopterin biosynthesis MoeB protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_20
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(13900..14700)
DNA (801bp) protein (267aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_21
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

15051..15998
DNA (948bp) protein (316aa)
dTDP-glucose 4,6-dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XUD9_RHIRD
UDP-glucose 4-epimerase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_22
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

16006..16701
DNA (696bp) protein (232aa)
Nucleotidyl transferase family protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5REY2_9PLAN
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_23
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

16698..18014
DNA (1317bp) protein (439aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
hypothetical protein id=5241109 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_24
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

18029..18772
DNA (744bp) protein (248aa)
dolichol-phosphate mannosyltransferase (EC:2.4.1.83); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
family 2 glycosyl transferase; K07027 id=5241108 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_25
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

18776..19792
DNA (1017bp) protein (339aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FFT7_9CLOT
GHMP kinase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_26
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

19776..20369
DNA (594bp) protein (198aa)
gmhA; phosphoheptose isomerase (EC:5.3.1.28) Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
gmhA; phosphoheptose isomerase (EC:5.3.1.28)
Phosphoheptose isomerase GmhA n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X1B4_RHIFR
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_27
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

20366..21961
DNA (1596bp) protein (532aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Uncharacterized protein id=4490372 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_28
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(22164..22448)
DNA (285bp) protein (95aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_4520_29
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(22506..23225)
DNA (720bp) protein (240aa)
hypothetical protein; K08982 putative membrane protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Putative uncharacterized protein id=3594573 bin=GWA1_ZB2_49_26 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
Displaying 29 items

View Taxonomy