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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181

Search features with annotation key words

Displaying items 61-90 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_61
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(61326..61871)
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035D517A
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
50S ribosomal protein L6
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_62
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(62047..62439)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037C1A94
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
30S ribosomal protein S8
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_63
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

62461..62988
DNA (528bp) protein (176aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_64
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(62815..63366)
DNA (552bp) protein (184aa)
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
50S ribosomal protein L5 id=2824244 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
50S ribosomal protein L5
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_65
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(63487..63771)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036D7C7C
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
50S ribosomal protein L24
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_66
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(63928..64293)
DNA (366bp) protein (122aa)
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
50S ribosomal protein L14 id=3736637 bin=GWC2_OD1_43_27 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
rplN; 50S ribosomal protein L14
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_67
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(64395..64637)
DNA (243bp) protein (81aa)
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
30S ribosomal protein S17 id=2154494 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S17
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_68
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(64621..64821)
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_69
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(64975..65388)
DNA (414bp) protein (138aa)
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=15190546 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rplP; 50S ribosomal protein L16
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_70
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(65431..66117)
DNA (687bp) protein (229aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GVZ4_9ZZZZ
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
30S ribosomal protein S3
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_71
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(66107..66454)
DNA (348bp) protein (116aa)
rplV; 50S ribosomal protein L22 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
50S ribosomal protein L22 id=2824330 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rplV; 50S ribosomal protein L22
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_72
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(66620..66931)
DNA (312bp) protein (104aa)
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Ribosomal protein S19 id=3736630 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
30S ribosomal protein S19
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_73
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(66942..67784)
DNA (843bp) protein (281aa)
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Translation protein SH3-like id=5802990 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplB; 50S ribosomal protein L2
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_74
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(67888..68319)
DNA (432bp) protein (144aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
50S ribosomal protein L23 id=2824337 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rplW; 50S ribosomal protein L23
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_75
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(68306..69022)
DNA (717bp) protein (239aa)
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=5802992 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L4
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_76
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(69084..69695)
DNA (612bp) protein (204aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=120511 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
50S ribosomal protein L3
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_77
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(70053..70400)
DNA (348bp) protein (116aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=8872 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
rpsJ; 30S ribosomal protein S10
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_78
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(70414..71607)
DNA (1194bp) protein (398aa)
tuf1; elongation factor Tu; K02358 elongation factor Tu Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Elongation factor Tu id=2824349 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
tuf2; elongation factor Tu
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_79
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(71800..71919)
DNA (120bp) protein (40aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_80
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(71916..72119)
DNA (204bp) protein (68aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_81
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(72073..72375)
DNA (303bp) protein (101aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_82
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

72582..74657
DNA (2076bp) protein (692aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Transcription-repair coupling factor id=2824521 bin=GWC1_OD1_38_17 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
transcription-repair coupling factor
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_83
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

74662..74784
DNA (123bp) protein (41aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_84
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

74885..76357
DNA (1473bp) protein (491aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_85
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(76430..77614)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000382EA16
rpfA; 30S ribosomal protein S1 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
rpfA; 30S ribosomal protein S1
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_86
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

77789..78406
DNA (618bp) protein (206aa)
Marine sediment metagenome DNA, contig: S06H3_S10713 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_87
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

78393..78644
DNA (252bp) protein (84aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_88
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


78710..81139
DNA (2430bp) protein (810aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] id=5803528 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA gyrase subunit A (EC:5.99.1.3)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_89
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

81136..81675
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI00036DDD1D
methylase involved in ubiquinone/menaquinone biosynthesis Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_90
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

81672..82982
DNA (1311bp) protein (437aa)
sugar ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
ABC transporter, solute-binding protein id=2934009 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
sugar ABC transporter substrate-binding protein
Displaying items 61-90 of 97 in total

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