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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_1
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

1..657
DNA (657bp) protein (219aa)
Recombinase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Recombinase id=3486293 bin=GWA1_ZB2_49_26 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_2
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(734..1279)
DNA (546bp) protein (182aa)
Bacitracin transport permease protein BCRC Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Uncharacterized protein ywoA id=4775010 bin=GWA2_CPR4_42_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
Bacitracin transport permease protein BCRC
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_3
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(1290..2135)
DNA (846bp) protein (282aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] Tax=RIFCSPLOWO2_01_FULL_RIF_
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5)
Bifunctional protein FolD id=4530143 bin=GWF2_Firmicute_51_9 species=Thiovulum sp. ES genus=Thiovulum taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Firmicute_51_9 organism_group=Firmicute
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_4
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(2135..3355)
DNA (1221bp) protein (407aa)
glycine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXS1_9BACT
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_5
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(3387..4088)
DNA (702bp) protein (234aa)
nucleotidyl transferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_c
glucose-1-phosphate thymidylyltransferase (strD) n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4C9E id=136836 bin=ACD8 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
Glucosamine-1-phosphate N-acetyltransferase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_6
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(4174..6681)
DNA (2508bp) protein (836aa)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Leucine--tRNA ligase id=2720494 bin=GWA1_ZB2_49_26 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
leucyl-tRNA synthetase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_7
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(6697..7530)
DNA (834bp) protein (278aa)
yabD; deoxyribonuclease (EC:3.1.21.-); K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hydrolase TatD n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B325E5
hydrolase TatD
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_8
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(7558..9138)
DNA (1581bp) protein (527aa)
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase id=4783215 bin=GWC2_OD1_43_27 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_9
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(9138..10172)
DNA (1035bp) protein (345aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein id=5803290 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_10
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(10182..11447)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2GGW6_9BACT
peptidase M16 domain-containing protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
peptidase M16 domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_11
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

11528..12064
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVS4_NITHN
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_12
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(12137..13429)
DNA (1293bp) protein (431aa)
glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Glycine--tRNA ligase id=2824158 bin=GWC1_OD1_38_17 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
glycyl-tRNA synthetase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_13
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(13434..15344)
DNA (1911bp) protein (637aa)
id=2824162 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
id=2824162 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_14
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(15360..15863)
DNA (504bp) protein (168aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_15
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(15860..19219)
DNA (3360bp) protein (1120aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003827A64
isoleucyl-tRNA synthetase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_16
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(19226..19768)
DNA (543bp) protein (181aa)
ppiA; peptidyl-prolyl cis-trans isomerase A; K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0Z3_CALAS
ppiA; peptidyl-prolyl cis-trans isomerase A
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_17
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(19865..20326)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036554EC
DoxX protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
DoxX protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_18
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(20414..21133)
DNA (720bp) protein (240aa)
cytochrome c biogenesis transmembrane protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
cytochrome c biogenesis transmembrane protein id=5044143 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cytochrome c biogenesis transmembrane protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_19
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(21187..21993)
DNA (807bp) protein (269aa)
Putative membrane protein n=1 Tax=Synechococcus sp. PCC 7502 RepID=K9SVW4_9SYNE
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_20
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(22144..22896)
DNA (753bp) protein (251aa)
Protein-disulfide isomerase n=1 Tax=uncultured bacterium RepID=K1Y6L1_9BACT
DSBA oxidoreductase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Protein-disulfide isomerase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_21
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(22934..23623)
DNA (690bp) protein (230aa)
anaerobic ribonucleoside-triphosphate reductase activating protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Pyruvate-formate lyase-activating enzyme n=4 Tax=environmental samples RepID=Q64A12_9ARCH id=8916 bin=ACD15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
anaerobic ribonucleoside-triphosphate reductase activating protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_22
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(23627..25792)
DNA (2166bp) protein (722aa)
nrdD; anaerobic ribonucleoside triphosphate reductase; K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
anaerobic ribonucleoside-triphosphate reductase; K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] id=24610750 bin=RAAC11 species=Spirochaeta bajacaliforniensis genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=RAAC11 organism_group=Unknown_CP
nrdD; anaerobic ribonucleoside triphosphate reductase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_23
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


comp(25975..27603)
DNA (1629bp) protein (543aa)
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
arginyl-tRNA synthetase (EC:6.1.1.19)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00038042E2
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_24
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(27704..28294)
DNA (591bp) protein (197aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_25
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(28788..30068)
DNA (1281bp) protein (427aa)
phosphoribosylamine/glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
phosphoribosylamine/glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WVG6_KYRT2
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_26
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(30842..31285)
DNA (444bp) protein (148aa)
SsrA-binding protein; K03664 SsrA-binding protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
SsrA-binding protein id=4731743 bin=GWC2_OD1_43_27 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
SsrA-binding protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_27
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

31493..31732
DNA (240bp) protein (80aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_28
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

32188..33126
DNA (939bp) protein (313aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_29
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(33706..34080)
DNA (375bp) protein (125aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_181_30
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(34204..34674)
DNA (471bp) protein (157aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Displaying items 1-30 of 97 in total

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