name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_31
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
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Not on your lists |
33513..33728
|
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
transmembrane_regions 13..35 id=120773 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
secG; preprotein translocase, SecG subunit
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_32
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
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Not on your lists |
33754..35484
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putative periplasmic oligopeptide-binding protein of oligopeptide ABC transporter; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein id=5803423 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
putative periplasmic oligopeptide-binding protein of oligopeptide ABC transporter
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_33
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
35923..36180
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Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_34
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
36287..38050
|
RNA-metabolising metallo-beta-lactamase; K12574 ribonuclease J [EC:3.1.-.-] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RNA-metabolising metallo-beta-lactamase id=1766048 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
RNA-metabolising metallo-beta-lactamase
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_35
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
38119..39075
|
trpS; tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Tryptophan--tRNA ligase id=2670112 bin=GWA1_ZB2_49_26 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
trpS; tryptophanyl-tRNA synthetase
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_36
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(39124..40500)
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glmM; phosphomannomutase; K01840 phosphomannomutase [EC:5.4.2.8] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Phosphomannomutase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0V7_THERP
glmM; phosphomannomutase
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_37
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
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Not on your lists |
40621..41040
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hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037CF0E5
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
rpsF; 30S ribosomal protein S6
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_38
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
41203..41634
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single-strand binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
single-strand binding protein; K03111 single-strand DNA-binding protein id=5803295 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ssb; Single-stranded DNA-binding protein
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_39
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
41736..41948
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30S ribosomal protein S18 n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NI08_9LACT
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
30S ribosomal protein S18
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_40
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(42026..43021)
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RecA protein; K03553 recombination protein RecA Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
protein recA; K03553 recombination protein RecA id=5803301 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
recombinase A
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_41
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(43138..43521)
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Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_42
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(43508..45691)
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putative cell division FtsK/SpoIIIE Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Cell divisionFtsK/SpoIIIE id=4790083 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
putative cell division FtsK/SpoIIIE
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_43
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(45830..49420)
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DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037A4755
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_44
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(49429..52656)
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rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037C611A
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_45
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
52919..53122
|
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
|
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_46
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(53094..54005)
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hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003796D66
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
protein-export membrane protein SecF
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_47
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(54010..55314)
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hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000361ED4C
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
protein-export membrane protein SecD
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_48
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(55346..55975)
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tmk; thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
tmk; thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=KTHY_SYNJB
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_49
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(56089..56514)
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rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=9043 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
rplK; 50S ribosomal protein L11
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_50
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(56743..57288)
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hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000366B9C3
nusG; transcription antitermination factor Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Transcription termination/antitermination protein nusG
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_51
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(57429..57614)
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transmembrane_regions 30..52 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
transmembrane_regions 30..52 id=2871 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_52
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(57694..59709)
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gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000361FCA2
gyrB; DNA gyrase subunit B
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_53
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
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Not on your lists |
comp(59786..61825)
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phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036FB867
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_54
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(61995..63053)
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pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanyl-tRNA synthetase, alpha subunit id=3423033 bin=GWA1_ZB2_49_26 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_55
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
63298..63660
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two component response regulator Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Response regulator receiver protein id=2966076 bin=GWA1_ZB2_49_26 species=Pseudogulbenkiania ferrooxidans genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Two component transcriptional regulator, winged helix
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_56
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(63671..66220)
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ATPase AAA-2 domain-containing protein; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
clp protease ATP binding subunit id=1263222 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
Clp protease ATP-binding protein
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_57
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(66230..66619)
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id=3544384 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
id=3544384 bin=GWA1_ZB2_49_26 species=Pyramidobacter piscolens genus=Pyramidobacter taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_58
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
comp(66718..67476)
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Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CW76_9BACT
putative F420-0--gamma-glutamyl ligase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
putative F420-0--gamma-glutamyl ligase
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_59
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
67504..67704
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Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_60
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
|
Not on your lists |
67706..67927
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id=1743920 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
id=1743920 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
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