ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_395_44

Organism: Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_44_230

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 ASCG 10 / 38
Location: comp(49429..52656)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2117
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 999.99
  • Bit_score: 1171
  • Evalue 0.0
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037C611A similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 999.99
  • Bit_score: 1410
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_12_44_230 → RIF-OD1-12 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 3228
ATGCAAAAAAAATATTTTTCTAAGTATAAGGAACCTCTTACTGAACTGCCGTATCTGGCAAAAGTCCAGCTCGACTCGTATGCATGGCTTTTAAAAAAAGGATTAAAGGAGGTCTTTGATGAGTTTAGCCCCATTGAAGATGTTACTGGGAAGGAGTTTGCATTGGACTTTGTTAATTTTTCTCTCGATGATGTGAGTCGTGATGAATATCACGCCAAAGCGCATAATCTTTCTTATGAAGCGCCGTTGAGAGTGACAGCACGATTGACCAATAAAAATACTGGAGAAATAAAAACCCAGGACATTTTCTTTGCCGATTTTCCGTTAATGACAAAGAGGGGGACATTTATTATTAACGGCATAGAACGTGTTATCGTTTCACAACTGGTCCGTTCGTTCGGAGTATATTTTACTCTTCATTATCATCGCGGAAAGAAGTTATTTGGCGCAAAGATTATCCCGGGTCGTGGTGTATGGCTTGAGTTTGAGACAGACGCTGAAGGAGTAATTTGGGTGAAGATTGACAGAAAAAGAAAAATTTCCGCAACGACATTGCTCCGCATATTCGGCCTTGAAAAGGAAAGTGCCATAAAGGAGCGGTTCCGTGATATTGATAATGGAGAAATATCATTTATGGAAAAGACGCTTTCCAAGGATCTCGCGAAGACAGCGGACGATGCGTATGTGGAGGTATACAAACGCATAAGGCCTGGCGATCTCGCAACTCCTGATAATGCCCGGCATCTTATTGAAAATACCTTTTCCAGTGCCCGGTATGATATTTCTCCGGTTGGACGGTATAAAACAAATATTCGCTTCGCTCACTTTAAAGTGCCCAAACCGGATGTTCGTGTGTTAACGCTTGATGACATCGTTTGTACTATTTCCGAGATTATCAGGAAAAACAATACTCCCGATGAACTTCCTGATGATATTGATCATCTTGGGCATCGAAGAATTCGCGGAATGGGAGAAATGTTGCAGAACCGTCTTCGGGTCGGTCTTGCACGCATGGAGCGGCATATAAGAGACCGCATGTCTGTTTTAGACGCCGAAACCTTAACACCTCTGCAGGTTATTAATTCCCGCCCCTTTATGACGGTGTTGAGAGATTTTTTTATGACAAACCAGCTCTCGCAGTTTATGGATCAGGTCAATGTTCTGGCTGAATTGGAGCATAAACGAAGACTTTCTGCGCTTGGACCGGGAGGGTTGACGCGAGAGCGGGCTGGATTTGAAGTGCGTGACGTTCACCCATCTCACTATGGAAGGATTTGTCCTATCCAAACCCCAGAAGGTCCTAATATCGGTCTCGTTGGCCACCTTTCCATATACGCGTCAATTAATGAATTTGGGCTCTTGGAAACTCCATATAGGAAGGTTGTTGACGGCGTCATTACAGATGAGATACGTCTTATGACTGCATTTGAAGAGATGCAGCATATCATTGCCCATGGGAGTGTCCAATACGATGATAGCAGGATTCTTGATAAGGAAGTGGAGGCGAGGATAAAAGGCAGTTTTGGTTTTGTGCCCCGTGAAGCGATTGAATATATTGATGTTTCTTCGCAACAGGCGTTTAGTATCGCGACCTGTCTTATTCCATTTCTTGGCCATGATGATGCAAATCGAGCGCTTATGGGTTCAAATATGCAGCGGCAGGCAGTTCCATGTATTAAAGCCGACCCTCCCCTCGTTGGCACCGGTATGGAGTCCAGGGCAGCGAGGGACTCCGGACAAATCATTATCGCCGAACAGGACGGCAAAGTGGTGCATGCGGATGCACAGAACATTGTTGTTCGGTCTGGAGGAAGAAGCAGAGAGTATCCTCTGATTAATTTTATGCGTTCCAATCAGGTAACAGTTCTTCACCACACACCACGTGTGGCGAAGGGAATGAAAGTGCGTGCCGGAGATCTTTTGGCAGACAACTCATCAACCAAGGATGGAGACTTGGCCTTGGGACAGAATTTGCTTGTCGCCTTTCTCTCTTGGAGAGGCGCAAACTTTGAGGACGCAATTATTGTTTCAGAGCGCCTTGTAAAAGACGATCGTTTTACCTCTATCCATATTGAAGAATTCACTGTGAATGTGCGCGACACCAAATTAGGAGAAGAAATAACCACTCCAGACATTCCAAACGTGGGAGAAGAAAAGCTTAAAGACCTTGATGAAGATGGTATTGTGCGTATCGGTGCGGAAGTGCGGGAAGGGGATATTCTCGTGGGGAAGATTTCTCCAAAAGGTGAGATTGATCTTACGCCGGAGGAACGCCTGTTGCATGCTATTTTTGGAGAAAAAGCGCGTGATGTGAAAGATACGTCGCTGAAGCTTCCAAACGGCAAGCACGGCAGGGTTGTCGGTGTAAAGGTGTTTTCGAGAGAAGAGGGTGATCGCTTGGAATCGGGAGTGATTAAACAGGTGCAGGTGGAAGTAGCGCAATTAAGGCGAATATCTGTTGGGGATAAGCTTGCGGGAAGACATGGAAATAAAGGTGTTATCTCTAAAATTTTACCAGAGGAGGATATGCCGTATCTTGAGGACGGAACGCCAGTTGACATGATATTGAATCCTTTGGGAGTCGCGTCTCGTATGAATCTCGGACAGATTTTGGAAACACACTTGGGGTTGGCCGCGCATACACTTAAGTATCGTGCGGTGTGTCCGGCGCTGACAAGTCCAAGCGAGCAGGAAATTCGGGATGAACTGGAACACGCCGGTTTTTCGAAAGACGGAAAGGTTCGGTTGTATGACGGCAGAACAGGTGAGGTATTTAGTCAGAAAGTTACGGTTGGATATATTTATATGATGAAATTAAATCACATGGTGGAAGATAAAATCCATATGCGTTCTATTGGTTCGTATTCTTTAATCACCCAGCAGCCGCTTGGAGGGAAAGCACAGGGAGGGGGACAGCGTTTTGGCGAGATGGAAGTGTGGGCGCTGGAGGGATATGGAGCGGCCAGCACACTTCAGGAAATGATCACTATCAAGTCTGACGATGTAAGCGGACGCGCATCTATCTATGATTCAATAGTGCGCGGTGAGCGAAGGAAAAGTCCTCATATTCCAACATCATTTCATGTATTAGTGAACGAGTTAAAAGGTCTTGCGCTTGACGTTGTTATAAATTACTCCGAACAGTCTCGTGAAGAAGAGGAAGAAACGGGTGAAAAGGAGACAACTAAGGCGTCAGGAAAAGTTTTAGAAAAACAACGTGCAGCATAA
PROTEIN sequence
Length: 1076
MQKKYFSKYKEPLTELPYLAKVQLDSYAWLLKKGLKEVFDEFSPIEDVTGKEFALDFVNFSLDDVSRDEYHAKAHNLSYEAPLRVTARLTNKNTGEIKTQDIFFADFPLMTKRGTFIINGIERVIVSQLVRSFGVYFTLHYHRGKKLFGAKIIPGRGVWLEFETDAEGVIWVKIDRKRKISATTLLRIFGLEKESAIKERFRDIDNGEISFMEKTLSKDLAKTADDAYVEVYKRIRPGDLATPDNARHLIENTFSSARYDISPVGRYKTNIRFAHFKVPKPDVRVLTLDDIVCTISEIIRKNNTPDELPDDIDHLGHRRIRGMGEMLQNRLRVGLARMERHIRDRMSVLDAETLTPLQVINSRPFMTVLRDFFMTNQLSQFMDQVNVLAELEHKRRLSALGPGGLTRERAGFEVRDVHPSHYGRICPIQTPEGPNIGLVGHLSIYASINEFGLLETPYRKVVDGVITDEIRLMTAFEEMQHIIAHGSVQYDDSRILDKEVEARIKGSFGFVPREAIEYIDVSSQQAFSIATCLIPFLGHDDANRALMGSNMQRQAVPCIKADPPLVGTGMESRAARDSGQIIIAEQDGKVVHADAQNIVVRSGGRSREYPLINFMRSNQVTVLHHTPRVAKGMKVRAGDLLADNSSTKDGDLALGQNLLVAFLSWRGANFEDAIIVSERLVKDDRFTSIHIEEFTVNVRDTKLGEEITTPDIPNVGEEKLKDLDEDGIVRIGAEVREGDILVGKISPKGEIDLTPEERLLHAIFGEKARDVKDTSLKLPNGKHGRVVGVKVFSREEGDRLESGVIKQVQVEVAQLRRISVGDKLAGRHGNKGVISKILPEEDMPYLEDGTPVDMILNPLGVASRMNLGQILETHLGLAAHTLKYRAVCPALTSPSEQEIRDELEHAGFSKDGKVRLYDGRTGEVFSQKVTVGYIYMMKLNHMVEDKIHMRSIGSYSLITQQPLGGKAQGGGQRFGEMEVWALEGYGAASTLQEMITIKSDDVSGRASIYDSIVRGERRKSPHIPTSFHVLVNELKGLALDVVINYSEQSREEEEETGEKETTKASGKVLEKQRAA*