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RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_1
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(3..1115)
DNA (1113bp) protein (371aa)
VanW family protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
Putative uncharacterized protein id=2824017 bin=GWC1_OD1_38_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
VanW family protein
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_2
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(1115..1507)
DNA (393bp) protein (131aa)
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
Protein containing Heat shock protein Hsp20 domain id=2824019 bin=GWC1_OD1_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
heat shock protein Hsp20
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_3
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(1535..2266)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003801EA9
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_4
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


comp(2271..4316)
DNA (2046bp) protein (682aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000369942C
valyl-tRNA synthetase
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_5
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


comp(4330..5358)
DNA (1029bp) protein (343aa)
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp id=3736504 bin=GWC2_OD1_43_27 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_6
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(5466..7169)
DNA (1704bp) protein (568aa)
NUDIX hydrolase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSE8_9BACT id=133487 bin=ACD81 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
NUDIX hydrolase
NUDIX hydrolase Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_7
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(7166..7558)
DNA (393bp) protein (131aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_8
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

7967..8341
DNA (375bp) protein (125aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_9
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

8341..8643
DNA (303bp) protein (101aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_10
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

8861..9712
DNA (852bp) protein (284aa)
SspI n=1 Tax=Sphaerotilus sp. ATCC 13925 RepID=J9T2A8_9BURK
hypothetical protein
SspI Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_11
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

9714..10904
DNA (1191bp) protein (397aa)
site-specific DNA-methyltransferase (adenine-specific) (EC:2.1.1.72) Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
site-specific DNA-methyltransferase (adenine-specific) (EC:2.1.1.72)
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8C5_PALPW
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_12
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(10928..11164)
DNA (237bp) protein (79aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_13
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

11172..11408
DNA (237bp) protein (79aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_14
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

11464..11733
DNA (270bp) protein (90aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
hypothetical protein id=41444 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_15
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

11740..12060
DNA (321bp) protein (107aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_16
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

12444..13142
DNA (699bp) protein (233aa)
Resolvase helix-turn-helix domain protein n=1 Tax=Micromonospora sp. L5 RepID=D3CGD6_9ACTO id=133597 bin=ACD81 species=Micromonospora sp. L5 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Resolvase helix-turn-helix domain protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_17
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

13198..14094
DNA (897bp) protein (299aa)
UDP-N-acetylenolpyruvoylglucosamine reductase; K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=planctomycete KSU-1 RepID=I3IH44_9PLAN
UDP-N-acetylenolpyruvoylglucosamine reductase
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_18
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


comp(14502..14843)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000369BE1B
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
50S ribosomal protein L20
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_19
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(14843..15031)
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_20
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(15033..15539)
DNA (507bp) protein (169aa)
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
Translation initiation factor IF-3 id=4731749 bin=GWC2_OD1_43_27 species=Clostridium sp. L2-50 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
infC; translation initiation factor IF-3
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_21
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(15580..16347)
DNA (768bp) protein (256aa)
hypothetical protein; K06966 Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
Uncharacterized protein id=1924460 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_22
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(16385..16912)
DNA (528bp) protein (176aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_23
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(16934..18727)
DNA (1794bp) protein (598aa)
oligoendopeptidase Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
oligoendopeptidase id=14424491 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
Oligoendopeptidase F
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_24
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(19557..20000)
DNA (444bp) protein (148aa)
smpB; SsrA-binding protein; K03664 SsrA-binding protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
SsrA-binding protein id=1924456 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
SsrA-binding protein
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_25
GWA2_OD1_44_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(20002..21045)
DNA (1044bp) protein (348aa)
Protease Do {ECO:0000313|EMBL:KKT28161.1}; TaxID=1619024 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_10.;"
Protease Do id=1924455 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
protease Do
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_26
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

21057..21551
DNA (495bp) protein (165aa)
putative 3-methyladenine DNA glycosylase (EC:3.2.2.-); K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
putative 3-methyladenine DNA glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase n=1 Tax=uncultured bacterium RepID=K2F1Z5_9BACT
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_27
GWB1_OD1_45_11_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(21674..22726)
DNA (1053bp) protein (351aa)
Retron-type reverse transcriptase {ECO:0000313|EMBL:KKT90383.1}; TaxID=1619026 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWB1_45_11.;"
RNA-directed DNA polymerase (reverse transcriptase) id=99175 bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RNA-directed DNA polymerase
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_28
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

22730..23080
DNA (351bp) protein (117aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
hypothetical protein id=86706 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_29
GWA2_OD1_44_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(23659..24519)
DNA (861bp) protein (287aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT28165.1}; TaxID=1619024 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_10.;"
id=5801247 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_2947_30
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


24767..26392
DNA (1626bp) protein (542aa)
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
argS; arginine--tRNA ligase (EC:6.1.1.19)
Arginine--tRNA ligase id=1924453 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Displaying items 1-30 of 45 in total

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