ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_1
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

2..424
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT50394.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
id=2185737 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_2
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

442..2673
DNA (2232bp) protein (744aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:KKT50393.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
ATP-dependent DNA helicase RecG id=2185738 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
ATP-dependent DNA helicase RecG
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_3
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(2627..3157)
DNA (531bp) protein (177aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_4
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(3210..4730)
DNA (1521bp) protein (507aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
hypothetical protein cdiviTM7_00321 id=3736510 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_5
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(4765..5712)
DNA (948bp) protein (316aa)
Polymerase III, delta subunit protein {ECO:0000313|EMBL:KKT50390.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
DNA polymerase III, delta subunit id=2185740 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
DNA polymerase III subunit delta
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_6
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(5709..6713)
DNA (1005bp) protein (335aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT50389.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
PT repeat-containing protein id=2185741 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_7
GWA2_OD1_44_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(6713..7591)
DNA (879bp) protein (293aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000313|EMBL:KKT28523.1}; TaxID=1619024 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_10.;"
Formamidopyrimidine-DNA glycosylase id=2185742 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Nei; formamidopyrimidine-DNA glycosylase
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_8
GWA2_OD1_44_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(7607..10240)
DNA (2634bp) protein (878aa)
DNA polymerase I (EC:2.7.7.7)
Polymerase protein {ECO:0000313|EMBL:KKT28522.1}; TaxID=1619024 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_10.;"
DNA polymerase id=2185743 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_9
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(10209..10640)
DNA (432bp) protein (144aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT50386.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
Uncharacterized protein id=2185744 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
ATP/GTP hydrolase
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_10
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(10777..11136)
DNA (360bp) protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT50385.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_11
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(11145..11918)
DNA (774bp) protein (258aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_12
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(11996..12373)
DNA (378bp) protein (126aa)
UPF0102 protein Ferpe_0061 n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9U9N0_FERPD
putative endonuclease related to Holliday junction resolvase; K07460 putative endonuclease Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
putative endonuclease related to Holliday junction resolvase
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_13
GWB1_OD1_45_11_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

12594..13607
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI000362142D
Peptidase M23 family protein {ECO:0000313|EMBL:KKT90043.1}; TaxID=1619026 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWB1_45_11.;"
peptidase M23 family protein
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_14
GWA2_OD1_44_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(13596..15125)
DNA (1530bp) protein (510aa)
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:KKT28516.1}; TaxID=1619024 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_10.;"
Mg chelatase, subunit ChlI id=4731958 bin=GWC2_OD1_43_27 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Mg chelatase, subunit ChlI
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_15
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(15125..15493)
DNA (369bp) protein (123aa)
DnaK suppressor protein DksA; K06204 DnaK suppressor protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
Sporulation protein, yteA family id=4621395 bin=GWA2_CPR4_42_17 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
dnaK suppressor protein DksA
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_16
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(16002..17240)
DNA (1239bp) protein (413aa)
Plus agglutinin n=2 Tax=Chlamydomonas reinhardtii RepID=Q6SSE6_CHLRE
Plus agglutinin Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_17
GWB1_OD1_45_11_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(17348..19459)
DNA (2112bp) protein (704aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000313|EMBL:KKT90039.1}; TaxID=1619026 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWB1_45_11.;"
Polyribonucleotide nucleotidyltransferase id=1968468 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
pnpA; polynucleotide phosphorylase
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_18
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(19584..20099)
DNA (516bp) protein (172aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
Putative uncharacterized protein id=1968463 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_19
GWA2_OD1_44_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


comp(20104..20367)
DNA (264bp) protein (88aa)
30S ribosomal protein S15 {ECO:0000313|EMBL:KKT28511.1}; TaxID=1619024 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_10.;"
30S ribosomal protein S15 id=1968459 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S15
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_20
GWB1_OD1_45_11_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

20445..21356
DNA (912bp) protein (304aa)
Tyrosine recombinase XerC {ECO:0000313|EMBL:KKT90036.1}; TaxID=1619026 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWB1_45_11.;"
Tyrosine recombinase XerD id=1968453 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
putative Tyrosine recombinase xerD
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_21
GWA2_OD1_44_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(21408..21650)
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT28509.1}; TaxID=1619024 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_10.;"
Putative uncharacterized protein id=3736374 bin=GWC2_OD1_43_27 species=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_22
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

21792..22334
DNA (543bp) protein (181aa)
tRNA-adenosine deaminase (EC:3.5.4.-) Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
tRNA-adenosine deaminase (EC:3.5.4.-)
CMP deaminase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B762A8
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_23
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(22493..22615)
DNA (123bp) protein (41aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_24
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

22684..22935
DNA (252bp) protein (84aa)
helix-turn-helix domain-containing protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
Helix-turn-helix domain protein id=4790080 bin=GWC2_OD1_43_27 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
helix-turn-helix domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_25
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

23007..23138
DNA (132bp) protein (44aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_26
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

23165..23404
DNA (240bp) protein (80aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_27
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

23401..23817
DNA (417bp) protein (139aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_28
GWB1_OD1_45_11_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(24196..25710)
DNA (1515bp) protein (505aa)
Translation initiation factor IF-2 {ECO:0000313|EMBL:KKT90028.1}; TaxID=1619026 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWB1_45_11.;"
Translation initiation factor IF-2 id=1968445 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
translation initiation factor IF-2
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_29
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(25842..26048)
DNA (207bp) protein (69aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_4053_30
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(26377..27084)
DNA (708bp) protein (236aa)
Amidophosphoribosyltransferase-like protein n=1 Tax=uncultured bacterium RepID=K2F1Q3_9BACT
comF family protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
competence protein ComF
Displaying items 1-30 of 45 in total

View Taxonomy