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RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_1
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

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comp(3..1823)
DNA (1821bp) protein (607aa)
Fic protein involved in cell division Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
YadA domain-containing structural protein id=2130296 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Fic protein involved in cell division
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_2
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

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2315..2527
DNA (213bp) protein (71aa)
Transcriptional regulator, MerR family {ECO:0000313|EMBL:KKT50570.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
Transcriptional regulator, MerR family id=2130250 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
MerR family transcriptional regulator
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_3
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

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comp(2731..2895)
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003662EDC
50S ribosomal protein L33 Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
50S ribosomal protein L33
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_4
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

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comp(3457..4257)
DNA (801bp) protein (267aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT50571.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
Putative uncharacterized protein id=5043007 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_5
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

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comp(4496..5074)
DNA (579bp) protein (193aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT50572.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
id=2130245 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_6
GWB1_OD1_45_11_partial, Yanofskybacteria, Parcubacteria, Bacteria

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comp(5074..5520)
DNA (447bp) protein (149aa)
Elongation factor Ts {ECO:0000313|EMBL:KKT89929.1}; TaxID=1619026 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWB1_45_11.;"
Elongation factor Ts id=2130242 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
translation elongation factor EFTs/EF1B dimerization
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_7
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

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comp(5520..6206)
DNA (687bp) protein (229aa)
30S ribosomal protein S2 {ECO:0000313|EMBL:KKT50574.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
30S ribosomal protein S2 id=2130240 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S2
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_8
GWA2_OD1_44_10, Yanofskybacteria, Parcubacteria, Bacteria

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comp(6361..7119)
DNA (759bp) protein (253aa)
Peptide chain release factor 1 {ECO:0000313|EMBL:KKT28254.1}; TaxID=1619024 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_10.;"
Peptide chain release factor 1 id=2130234 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
peptide chain release factor 1
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_9
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


comp(7234..7482)
DNA (249bp) protein (83aa)
50S ribosomal protein L31 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2M2_THERP
hypothetical protein; K02909 large subunit ribosomal protein L31 Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_10
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

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comp(7485..8198)
DNA (714bp) protein (238aa)
50S ribosomal protein L25 {ECO:0000313|EMBL:KKT50576.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
50S ribosomal protein L25 id=2130230 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
rplY; 50S ribosomal protein L25
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_11
GWA2_OD1_44_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(8231..9079)
DNA (849bp) protein (283aa)
Ketose-bisphosphate aldolase, class-II {ECO:0000313|EMBL:KKT28256.1}; TaxID=1619024 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_10.;"
Tagatose-bisphosphate aldolase id=2130227 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tagatose-bisphosphate aldolase
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_12
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(9076..10053)
DNA (978bp) protein (326aa)
PfkB family kinase, nonfunctional {ECO:0000313|EMBL:KKT50578.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
PfkB family kinase, partial id=2130223 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_13
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(10046..10672)
DNA (627bp) protein (209aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase id=2130220 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_14
GWA2_OD1_44_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(10672..11112)
DNA (441bp) protein (147aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT28259.1}; TaxID=1619024 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_10.;"
Putative ribose-5-phosphate isomerase B (Phosphoriboisomerase B) id=2130217 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
ribose-5-phosphate isomerase B
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_15
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(11237..12205)
DNA (969bp) protein (323aa)
nox1; NADH oxidase (EC:1.8.1.8) Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
nox1; NADH oxidase (EC:1.8.1.8)
Alkyl hydroperoxide reductase, F subunit id=2130214 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_16
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

12230..13531
DNA (1302bp) protein (434aa)
similar to dolichyl-phosphate-mannose--protein mannosyltransferase; K00728 dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_cura
Dolichyl-phosphate-mannose-protein mannosyltransferase, putative id=2130211 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
dolichyl-phosphate-mannose--protein O-mannosyl transferase
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_17
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(13537..14289)
DNA (753bp) protein (251aa)
ABC-2 type transporter n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AZ04_FRADG
ABC-2 type transporter {ECO:0000313|EMBL:KKT50584.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
ABC-2 type transporter
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_18
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(14293..15408)
DNA (1116bp) protein (372aa)
Daunorubicin resistance ABC transporter ATP-binding subunit n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XRG0_9PSEU
ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
ABC transporter ATP-binding protein
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_19
GWA2_OD1_44_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(15480..16094)
DNA (615bp) protein (205aa)
Superoxide dismutase {ECO:0000313|EMBL:KKT28616.1}; TaxID=1619024 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_10.;"
Superoxide dismutase id=2130209 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
manganese/iron superoxide dismutase
RIFCSPLOWO2_01_FULL_OD1_44_88_rifcsplowo2_01_scaffold_13439_20
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(16096..16242)
DNA (147bp) protein (49aa)
glutaredoxin-like protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
Glutaredoxin-like protein, YruB-family id=4352605 bin=GWC2_Spirochaete_52_13 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
glutaredoxin-like protein
Displaying 20 items

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