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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591

Search features with annotation key words

Displaying items 151-180 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_151
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(110173..110709)
DNA (537bp) protein (179aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_152

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comp(110746..111030)
DNA (285bp) protein (95aa)
Plasmid stabilization system {ECO:0000313|EMBL:KKT28845.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
Plasmid stabilization system id=5016970 bin=GWA2_OP3_53_43 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_153

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comp(111027..111236)
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30048.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_154
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


comp(111259..111732)
DNA (474bp) protein (158aa)
30S ribosomal protein S7 n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=RS7_THENN
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
30S ribosomal protein S7
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_155
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


comp(111729..112142)
DNA (414bp) protein (138aa)
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
30S ribosomal protein S12
30S ribosomal protein S12 id=5227519 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_156

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comp(112191..113156)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B649F4
Uncharacterized protein {ECO:0000313|EMBL:KKU30051.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_157

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comp(113221..113910)
DNA (690bp) protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30052.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_158

Not on your lists

comp(113986..114606)
DNA (621bp) protein (207aa)
Peptidase M50 {ECO:0000313|EMBL:KKT28851.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
Peptidase M50 id=1797410 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
peptidase M50
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_159

Not on your lists

114913..115284
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30054.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_160
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

115281..115439
DNA (159bp) protein (53aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_161

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115470..115838
DNA (369bp) protein (123aa)
OmpA/MotB domain protein {ECO:0000313|EMBL:KKT28853.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
hypothetical protein GobsU_20598 id=1839639 bin=GWD2_Deltaproteobacteria_55_8 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_162

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comp(115881..116180)
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30056.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_163
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(116241..116375)
DNA (135bp) protein (45aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_164
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

116403..116720
DNA (318bp) protein (106aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_165
GWC2_OD1_45_7_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(116863..117345)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037E1C6A
Uncharacterized protein {ECO:0000313|EMBL:KKU11691.1}; TaxID=1618621 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC2_45_7b.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_166

Not on your lists

comp(117323..117913)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A7I0_9BACT
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:KKU30059.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
DEAD/DEAH box helicase domain protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_167
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(117956..118960)
DNA (1005bp) protein (335aa)
hypothetical protein, partial n=1 Tax=Cupriavidus sp. WS RepID=UPI00035D7CD9
nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_1
ABC transporter, substrate-binding protein, aliphatic sulfonates family
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_168
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(119016..119417)
DNA (402bp) protein (134aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
DoxX family protein id=5800758 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DoxX family protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_169
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

119436..120257
DNA (822bp) protein (274aa)
seg Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
seg id=5803223 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_170

Not on your lists

comp(120234..120710)
DNA (477bp) protein (159aa)
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:KKT28861.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
tRNA/rRNA methyltransferase SpoU id=5803222 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
putative tRNA/rRNA methyltransferase (SpoU)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_171

Not on your lists

comp(120714..121478)
DNA (765bp) protein (255aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT28862.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
Putative uncharacterized protein id=1897378 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_172
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

121568..121993
DNA (426bp) protein (142aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Uncharacterized protein id=1939871 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_173

Not on your lists

122110..122757
DNA (648bp) protein (216aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30065.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Uncharacterized protein id=1939871 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_174

Not on your lists

comp(122767..124077)
DNA (1311bp) protein (437aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase {ECO:0000313|EMBL:KKU30066.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacter
UDP-N-acetylmuramyl-tripeptide synthetase id=2934166 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
UDP-N-acetylmuramyl tripeptide synthetase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_175
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

124271..124474
DNA (204bp) protein (68aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_176

Not on your lists

comp(124483..125154)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037598EF
Methyltransferase type 11 {ECO:0000313|EMBL:KKU30067.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
type 11 methyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_177

Not on your lists

comp(125162..125650)
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30068.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_178

Not on your lists

comp(125670..126239)
DNA (570bp) protein (190aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000313|EMBL:KKT28869.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
Holliday junction ATP-dependent DNA helicase RuvA id=3305459 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
Holliday junction DNA helicase subunit RuvA
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_179

Not on your lists

126260..128266
DNA (2007bp) protein (669aa)
excinuclease ABC subunit B n=1 Tax=Ureibacillus thermosphaericus RepID=UPI0002DC776E
UvrABC system protein B {ECO:0000313|EMBL:KKT28870.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
excinuclease ABC subunit B
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_180
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


128284..128523
DNA (240bp) protein (80aa)
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
30S ribosomal protein S20 id=2803127 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
30S ribosomal protein S20
Displaying items 151-180 of 183 in total

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