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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591

Search features with annotation key words

Displaying items 121-150 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_121

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comp(93272..93499)
DNA (228bp) protein (76aa)
30S ribosomal protein S17 {ECO:0000313|EMBL:KKU30020.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
30S ribosomal protein S17 id=2154494 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S17
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_122
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(93505..93702)
DNA (198bp) protein (66aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_123
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


comp(93705..94115)
DNA (411bp) protein (137aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=15190546 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rplP; 50S ribosomal protein L16
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_124
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(94125..94790)
DNA (666bp) protein (222aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GQ04_9ZZZZ
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
rpsC; 30S ribosomal protein S3
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_125
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(94806..95144)
DNA (339bp) protein (113aa)
50S ribosomal protein L22 n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LXP9_THEPS
rplV; 50S ribosomal protein L22 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
rplV; 50S ribosomal protein L22
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_126
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

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comp(95149..95505)
DNA (357bp) protein (119aa)
Ribosomal protein S19 {ECO:0000313|EMBL:KKT60177.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
Ribosomal protein S19 id=1956475 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S19
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_127
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


comp(95507..96343)
DNA (837bp) protein (279aa)
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
50S ribosomal protein L2, plastid id=5227350 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplB; ribosomal protein L2
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_128

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comp(96348..96827)
DNA (480bp) protein (160aa)
50S ribosomal protein L23 n=1 Tax=uncultured bacterium RepID=K1ZZJ7_9BACT
50S ribosomal protein L23 {ECO:0000313|EMBL:KKU30026.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
rplW; 50S ribosomal protein L23
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_129

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comp(96817..97491)
DNA (675bp) protein (225aa)
50S ribosomal protein L4 n=1 Tax=uncultured bacterium RepID=K1ZIG8_9BACT
50S ribosomal protein L4, large subunit ribosomal protein L4 {ECO:0000313|EMBL:KKT29898.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
50S ribosomal protein L4P
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_130
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

97864..98178
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003803435
transcriptional regulator, ArsR family Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
transcriptional regulator
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_131
GWC2_OD1_45_7_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

98183..99586
DNA (1404bp) protein (468aa)
merA1; mercuric reductase (EC:1.16.1.1)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000381DF1B
Mercuric reductase {ECO:0000313|EMBL:KKU12476.1}; TaxID=1618621 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC2_45_7b.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_132
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

99583..100092
DNA (510bp) protein (170aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_133
GWC2_OD1_45_7_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

100108..100701
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036EA99C
Uncharacterized protein {ECO:0000313|EMBL:KKU12474.1}; TaxID=1618621 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC2_45_7b.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_134

Not on your lists

100717..101691
DNA (975bp) protein (325aa)
Disulfide bond oxidoreductase D family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEZ3_NITGG
Disulfide bond oxidoreductase D family protein {ECO:0000313|EMBL:KKU30031.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;
disulfide bond oxidoreductase D family protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_135

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101688..101867
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30032.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_136

Not on your lists

101851..102117
DNA (267bp) protein (89aa)
Glutaredoxin 2 (Modular protein) {ECO:0000313|EMBL:KKU30033.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Thioredoxin-like id=71854 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_137
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(102269..102451)
DNA (183bp) protein (61aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_138

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comp(102495..102920)
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30034.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_139

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comp(102917..103144)
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30035.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_140

Not on your lists


comp(103164..103751)
DNA (588bp) protein (196aa)
50S ribosomal protein L3 {ECO:0000313|EMBL:KKU30036.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
rplC; Ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5802993 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplC; 50S ribosomal protein L3
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_141

Not on your lists


comp(103753..104094)
DNA (342bp) protein (114aa)
30S ribosomal protein S10 {ECO:0000313|EMBL:KKT28834.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
30S ribosomal protein S10 id=3423306 bin=GWA1_ZB2_49_26 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
30S ribosomal protein S10
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_142
GWC2_OD1_45_7_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(104098..105291)
DNA (1194bp) protein (398aa)
Elongation factor Tu {ECO:0000313|EMBL:KKU12465.1}; TaxID=1618621 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC2_45_7b.;"
Elongation factor Tu id=3736618 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
tufA; elongation factor Tu
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_143

Not on your lists

comp(105440..105616)
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30039.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_144

Not on your lists

comp(105613..105819)
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30040.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_145
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(105828..106034)
DNA (207bp) protein (69aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_146
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(106069..106176)
DNA (108bp) protein (36aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_147
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

106304..106609
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B5F6BC
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_148
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

106558..106821
DNA (264bp) protein (88aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_149
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(107117..107779)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000366C25E
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_150

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comp(107991..110081)
DNA (2091bp) protein (697aa)
Elongation factor G {ECO:0000313|EMBL:KKU30045.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Elongation factor G id=3736614 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
translation elongation factor G
Displaying items 121-150 of 183 in total

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