ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_591_140

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: comp(103164..103751)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 {ECO:0000313|EMBL:KKU30036.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 195.0
  • Bit_score: 394
  • Evalue 6.30e-107
rplC; Ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5802993 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 198.0
  • Bit_score: 237
  • Evalue 1.60e-59
rplC; 50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 201.0
  • Bit_score: 207
  • Evalue 4.90e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGAAATTTATTTTGGCGAGAAAAATTGAGATGTCGCAAATTTTTGACGGTAATGGACGGGTTCAACCGGTTACTTGGCTGGAAGCCGGCCCCATTTTTGTTACGCAAAAAAAATCTGAAGAAAAGGACGGATACGTTGCCGTACAGGTCGGGTTTAGCGCGAAAAAGGGAAAAAACGTAGAAAAGCCGCAGAAAAAATTGGGAAATTTTCAGTATTTTCGCGAGTTTAAAACCAGCGCTTTAAATGTGGGCGACAAAATTGAGGCAACCGCTTTTGAGGAGGGCGACTTTGTAAATGTCAGTGGCGTTTCAAAAGGCAAAGGTTTTCAGGGCGTTGTAAAACGTCATGGTTTCCACGGCGGACCTAGAACTCACGGACAAAAACATTCCGAGCGCGAGCCGGGATCAATCGGCGCAACTTGGCCGCAAAGAGTTTTAAAAGGCATGCGCATGGCCGGGCACATGGGTGCGGAACGCGTCACCGTCAGCAATCTCAAAATCATCAAAATCATTCCCGAAAAAAATCTTATGGCCATCTCCGGCGCCATCCCAGGCCACCGCGGCAGTTTGGTGGAAGTGAGAGGATAA
PROTEIN sequence
Length: 196
MKFILARKIEMSQIFDGNGRVQPVTWLEAGPIFVTQKKSEEKDGYVAVQVGFSAKKGKNVEKPQKKLGNFQYFREFKTSALNVGDKIEATAFEEGDFVNVSGVSKGKGFQGVVKRHGFHGGPRTHGQKHSEREPGSIGATWPQRVLKGMRMAGHMGAERVTVSNLKIIKIIPEKNLMAISGAIPGHRGSLVEVRG*