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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_11484

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_11484_1
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(1..165)
DNA (165bp) protein (55aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_11484_2

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comp(132..1133)
DNA (1002bp) protein (334aa)
udgA; UDP-glucose dehydrogenase (EC:1.1.1.22)
UDP-glucose dehydrogenase {ECO:0000313|EMBL:KKU30229.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
UDP-glucose/GDP-mannose dehydrogenase dimerization id=4077955 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_11484_3

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comp(1190..2392)
DNA (1203bp) protein (401aa)
Fibronectin, type III domain protein {ECO:0000313|EMBL:KKT28718.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
Putative uncharacterized protein (Fragment) id=4800155 bin=GWC2_OD1_43_27 species=Dictyostelium fasciculatum genus=Dictyostelium taxon_order=Dictyosteliida taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
NLP/P60 protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_11484_4

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comp(2423..2956)
DNA (534bp) protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30231.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_11484_5

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comp(3098..5341)
DNA (2244bp) protein (748aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30232.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
TPR domain-containing protein id=5803035 bin=OD1_GWC2_34_28 species=Clostridiales bacterium 1_7_47FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_11484_6
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(5357..6229)
DNA (873bp) protein (291aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_11484_7

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comp(6239..7435)
DNA (1197bp) protein (399aa)
Glycosyl transferase n=2 Tax=Salmonella enterica subsp. enterica serovar Choleraesuis RepID=E8NIQ2_SALET
Mannosyl transferase {ECO:0000313|EMBL:KKU30234.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_11484_8
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(7505..8479)
DNA (975bp) protein (325aa)
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
GDP-mannose 4,6-dehydratase n=1 Tax=Bacillus methanolicus PB1 RepID=I3E4C8_BACMT
GDP-mannose 4,6-dehydratase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_11484_9

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comp(8550..9608)
DNA (1059bp) protein (353aa)
N-acylneuraminate-9-phosphate synthase (EC:2.5.1.57)
Uncharacterized protein MJ1065 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YGX4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKU30236.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_11484_10
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(9710..11419)
DNA (1710bp) protein (570aa)
radical SAM protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Putative uncharacterized protein id=2171010 bin=GWB2_Nitrospirae_rel_47_37 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
radical SAM protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_11484_11

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comp(11481..11846)
DNA (366bp) protein (122aa)
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:KKU30238.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
4'-phosphopantetheinyl transferase id=4735759 bin=GWC2_OP3-like_45_7 species=Nitrosopumilus maritimus genus=Nitrosopumilus taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
4'-phosphopantetheinyl transferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_11484_12

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comp(11843..12160)
DNA (318bp) protein (106aa)
Lactoylglutathione lyase {ECO:0000313|EMBL:KKU30239.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Lactoylglutathione lyase id=4735760 bin=GWC2_OP3-like_45_7 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
lactoylglutathione lyase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_11484_13

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comp(12225..13829)
DNA (1605bp) protein (535aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30240.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Long-chain-fatty-acid--CoA ligase, putative id=4735761 bin=GWC2_OP3-like_45_7 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
fatty acid--CoA ligase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_11484_14

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comp(13801..14055)
DNA (255bp) protein (85aa)
Acyl carrier protein {ECO:0000313|EMBL:KKU30241.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Acyl carrier protein id=4735762 bin=GWC2_OP3-like_45_7 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
acyl carrier protein
Displaying 14 items

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