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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_1

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2..244
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30127.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_2

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429..1166
DNA (738bp) protein (246aa)
Transcriptional regulator of heat shock gene n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2634 id=96062 bin=ACD63 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Heat-inducible transcription repressor hrcA {ECO:0000313|EMBL:KKU30128.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
heat-inducible transcription repressor HrcA
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_3

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1144..1653
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037D9D64
Protein GrpE {ECO:0000313|EMBL:KKU30129.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
GrpE protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_4

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1650..2720
DNA (1071bp) protein (357aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30130.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_5
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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2757..4637
DNA (1881bp) protein (627aa)
molecular chaperone DnaK; K04043 molecular chaperone DnaK Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Chaperone protein DnaK id=2823849 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
molecular chaperone DnaK
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_6

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4641..5213
DNA (573bp) protein (191aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30132.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Putative uncharacterized protein id=1921149 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_7

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5210..6286
DNA (1077bp) protein (359aa)
Chaperone protein DnaJ {ECO:0000313|EMBL:KKU30133.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
chaperone protein DnaJ; K03686 molecular chaperone DnaJ id=5803415 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
dnaJ; chaperone protein DnaJ
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_8

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6295..6783
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30134.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_9
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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7128..9494
DNA (2367bp) protein (789aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
hypothetical protein id=5803020 bin=OD1_GWC2_34_28 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_10
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(9709..9954)
DNA (246bp) protein (82aa)
hypothetical protein; K07461 putative endonuclease Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
excinuclease ABC c subunit domain protein; K07461 putative endonuclease id=5085251 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_11
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(10139..10384)
DNA (246bp) protein (82aa)
hypothetical protein; K07461 putative endonuclease Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
excinuclease ABC c subunit domain protein; K07461 putative endonuclease id=5085251 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_12

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10591..11394
DNA (804bp) protein (268aa)
LOR/SDH bifunctional protein conserved domain protein n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S8X8_9CYAN
Bifunctional protein LOR/SDH {ECO:0000313|EMBL:KKU30136.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
bifunctional protein LOR/SDH
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_13

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11430..12506
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IPN4_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKU30137.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Male sterility domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_14

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12553..14136
DNA (1584bp) protein (528aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] id=5803553 bin=OD1_GWC2_34_28 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:KKU30138.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46
PAS/PAC sensor signal transduction histidine kinase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_15
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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14141..15547
DNA (1407bp) protein (469aa)
aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
aspartyl-tRNA synthetase (EC:6.1.1.12)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000368F2EE
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_16

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comp(15622..16986)
DNA (1365bp) protein (455aa)
Tryptophanase n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WGM1_DESOD
Tryptophanase {ECO:0000313|EMBL:KKU30140.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
tryptophanase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_17
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(17016..17585)
DNA (570bp) protein (190aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_18
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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17677..18387
DNA (711bp) protein (237aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=uncultured bacterium RepID=K2FV36_9BACT
chromosome segregation and condensation protein ScpA; K05896 segregation and condensation protein A Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
chromosome segregation and condensation protein ScpA
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_19

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18371..18925
DNA (555bp) protein (185aa)
Segregation and condensation protein B {ECO:0000313|EMBL:KKU30143.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
condensin subunit ScpB; K06024 segregation and condensation protein B id=15190194 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
scpB; segregation and condensation protein B
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_20

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18926..19801
DNA (876bp) protein (292aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] id=5803556 bin=OD1_GWC2_34_28 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:KKU30144.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_21
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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19886..20953
DNA (1068bp) protein (356aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13) Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] id=5803555 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_22

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20964..22505
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E1B0_9BACT
N-acyl-D-amino-acid deacylase {ECO:0000313|EMBL:KKU30146.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
N-acyl-D-aspartate/D-glutamate deacylase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_23
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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22513..23610
DNA (1098bp) protein (366aa)
stage V sporulation protein E; K03588 cell division protein FtsW Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
ftsW; cell division membrane protein; K03588 cell division protein FtsW id=16561 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
stage V sporulation protein E
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_24

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23607..24728
DNA (1122bp) protein (374aa)
murG2; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] id=5227062 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase {ECO:0000313|EMBL:KKU30148.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) ba
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_25
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

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24721..26082
DNA (1362bp) protein (454aa)
Glutamate-tRNA ligase {ECO:0000313|EMBL:KKT60031.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
Glutamate--tRNA ligase id=4838858 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
glutamyl-tRNA synthetase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_26

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26123..26305
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30150.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_27
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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26376..27617
DNA (1242bp) protein (414aa)
M24/M37 family peptidase Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
peptidase M23b id=5803516 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
M24/M37 family peptidase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_28
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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27619..27876
DNA (258bp) protein (86aa)
transmembrane_regions Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
transmembrane_regions id=5803515 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_29

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28014..28832
DNA (819bp) protein (273aa)
DNA-damage-inducible protein D family protein n=3 Tax=Bacteroides RepID=D1K5A6_9BACE
DNA-damage-inducible protein D {ECO:0000313|EMBL:KKU30153.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
damage-inducible protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_819_30

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28933..29544
DNA (612bp) protein (204aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKU30154.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
id=5226541 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Displaying items 1-30 of 59 in total

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