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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691

Search features with annotation key words

Displaying items 31-60 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_31

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28769..29848
DNA (1080bp) protein (360aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Selenomonas sp. oral taxon 892 str. F0426 RepID=U2KUW4_9FIRM
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:KKU30273.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_4
putative pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_32

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29917..30330
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30274.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_33
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(30367..31386)
DNA (1020bp) protein (340aa)
nucleoside-diphosphate-sugar epimerase Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
NDP-sugar dehydratase or epimerase id=5016390 bin=GWA2_OP3_52_12 species=Neptuniibacter caesariensis genus=Neptuniibacter taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
nucleoside-diphosphate-sugar epimerase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_34

Not on your lists

comp(31368..32999)
DNA (1632bp) protein (544aa)
Methyltransferase type 12 {ECO:0000313|EMBL:KKT29431.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
Methyltransferase type 12 id=4800213 bin=GWC2_OD1_43_27 species=Synechocystis sp. PCC 7509 genus=Synechocystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
type 11 methyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_35

Not on your lists

comp(33021..33809)
DNA (789bp) protein (263aa)
Methyltransferase, FkbM family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCL5_SINAD
Methyltransferase FkbM family {ECO:0000313|EMBL:KKU30277.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
FkbM family methyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_36

Not on your lists

comp(33793..34653)
DNA (861bp) protein (287aa)
Methyltransferase type 11 {ECO:0000313|EMBL:KKU30278.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
methyltransferase type 11 id=73510 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
type 11 methyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_37
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(34665..36419)
DNA (1755bp) protein (585aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_38

Not on your lists

36428..37429
DNA (1002bp) protein (334aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30280.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Uncharacterized protein id=3024524 bin=GWC2_Methylomirabilis_70_16 species=Mycobacterium colombiense genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_39

Not on your lists

comp(37417..39180)
DNA (1764bp) protein (588aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30281.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_40
GWC2_OP11_38_9_partial, Curtissbacteria, Microgenomates, Bacteria

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comp(39183..39572)
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ89663.1}; TaxID=1618414 species="Bacteria; Microgenomates.;" source="Microgenomates (Curtissbacteria) bacterium GW2011_GWC2_38_9.;"
id=4901199 bin=GWC2_OD1_43_27 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_41

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comp(39591..40490)
DNA (900bp) protein (300aa)
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:KKU30283.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_G
Methylase involved in ubiquinone/menaquinone biosynthesis id=4901192 bin=GWC2_OD1_43_27 species=Desulfobacter postgatei genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
type 12 methyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_42
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(40487..41404)
DNA (918bp) protein (306aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
dTDP-4-dehydrorhamnose reductase id=4901198 bin=GWC2_OD1_43_27 species=Thermococcus barophilus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_43

Not on your lists

comp(41364..42413)
DNA (1050bp) protein (350aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:KKU30285.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
dTDP-glucose 4,6-dehydratase id=4901196 bin=GWC2_OD1_43_27 species=Geobacillus stearothermophilus genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_44

Not on your lists

comp(42419..43660)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BRI6_9BACT
SAM-dependent methyltransferase {ECO:0000313|EMBL:KKU30286.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_45

Not on your lists

comp(43629..44393)
DNA (765bp) protein (255aa)
Glycosyl transferase family protein n=1 Tax=uncultured bacterium RepID=K2E850_9BACT
Glycosyl transferase, family 2 {ECO:0000313|EMBL:KKU30287.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
glycosyl transferase family protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_46

Not on your lists

comp(44395..45522)
DNA (1128bp) protein (376aa)
Glutamine-scyllo-inositol transaminase {ECO:0000313|EMBL:KKT29444.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
putative aminotransferase id=73511 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
arnB2; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB2
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_47

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comp(45526..46257)
DNA (732bp) protein (244aa)
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:KKU30289.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
TDP-fucosamine acetyltransferase id=4598238 bin=GWF2_OP9-related_38_17 species=Paenibacillus peoriae genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GCN5-related N-acetyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_48

Not on your lists

comp(46250..47179)
DNA (930bp) protein (310aa)
Glycosyl transferase, family 2 {ECO:0000313|EMBL:KKU30290.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Glycosyl transferase family 2 id=3930449 bin=GWF2_Nitrospirae_44_13 species=Cylindrospermum stagnale genus=Cylindrospermum taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
family 2 glycosyl transferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_49

Not on your lists

comp(47194..48843)
DNA (1650bp) protein (550aa)
Carbamoyltransferase family protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GS45_9SPHI
Carbamoyltransferase {ECO:0000313|EMBL:KKT29447.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
carbamoyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_50

Not on your lists

comp(48840..49538)
DNA (699bp) protein (233aa)
Methylase n=1 Tax=uncultured bacterium F39-01 RepID=I3VIE3_9BACT
Methyltransferase type 12 {ECO:0000313|EMBL:KKU30292.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
type 12 methyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_51

Not on your lists

comp(49669..50082)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GI26_METTF
Uncharacterized protein {ECO:0000313|EMBL:KKT29449.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_52

Not on your lists

comp(50079..50483)
DNA (405bp) protein (135aa)
Nucleotidyltransferase {ECO:0000313|EMBL:KKT29450.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
nucleotidyltransferase; K07076 id=2381 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
DNA polymerase subunit beta
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_53

Not on your lists

comp(50692..51426)
DNA (735bp) protein (245aa)
transaldolase (EC:2.2.1.2)
probable Transaldolase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A1C
Putative Transaldolase {ECO:0000313|EMBL:KKU30295.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_54
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(51410..51988)
DNA (579bp) protein (193aa)
histidinol-phosphatase (EC:3.1.3.15) Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
histidinol-phosphatase (EC:3.1.3.15)
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase id=4199827 bin=GWC2_Alphaproteobacteria_42_16 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_55

Not on your lists

comp(51955..52575)
DNA (621bp) protein (207aa)
sugar isomerase n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI00028856B3
Sugar isomerase {ECO:0000313|EMBL:KKU30297.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
sugar isomerase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_56

Not on your lists

comp(52580..53305)
DNA (726bp) protein (242aa)
nucleotidyl transferase n=2 Tax=Aminicenantes RepID=UPI0003B52CB7
Nucleotidyl transferase {ECO:0000313|EMBL:KKT29454.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
nucleotidyl transferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_57

Not on your lists

comp(53302..54237)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B4ACBF
Uncharacterized protein {ECO:0000313|EMBL:KKU30299.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
gmd; nucleoside-diphosphate-sugar epimerase ( dTDP-glucose 4,6-dehydratase)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_58

Not on your lists

comp(54262..54840)
DNA (579bp) protein (193aa)
Endonuclease n=1 Tax=planctomycete KSU-1 RepID=I3IIX8_9PLAN
Endonuclease {ECO:0000313|EMBL:KKU30300.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
restriction endonuclease
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_59

Not on your lists

comp(54842..55831)
DNA (990bp) protein (330aa)
cytosine-specific methyltransferase (EC:2.1.1.37)
Cytosine-specific methyltransferase n=8 Tax=Mycobacterium abscessus RepID=I8CAF1_MYCAB
Cytosine-specific methyltransferase {ECO:0000313|EMBL:KKT29457.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_60

Not on your lists

comp(55862..56872)
DNA (1011bp) protein (337aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT29458.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
putative LmbZ id=1955170 bin=GWA2_Polynucleobacter_45_21 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
Oxidoreductase domain protein
Displaying items 31-60 of 78 in total

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