ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_1

Not on your lists

comp(2..514)
DNA (513bp) protein (171aa)
dTDP-6-deoxy-L-hexose 3-O-methyltransferase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KMX4_9ARCH
dTDP-6-deoxy-L-hexose 3-O-methyltransferase {ECO:0000313|EMBL:KKU30245.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
dTDP-6-deoxy-L-hexose 3-O-methyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_2
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(547..765)
DNA (219bp) protein (73aa)
Putative dTDP-6-deoxy-L-hexose 3-O-methyltransferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F7A9_9PROT
putative dTDP-6-deoxy-L-hexose 3-O-methyltransferase
Putative dTDP-6-deoxy-L-hexose 3-O-methyltransferase Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_3
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(805..1563)
DNA (759bp) protein (253aa)
fabG; 3-ketoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-ketoacyl-ACP reductase n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI000312BA24
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_4

Not on your lists

comp(1560..2111)
DNA (552bp) protein (184aa)
UPI0003D1C80B related cluster n=1 Tax=unknown RepID=UPI0003D1C80B
Pseudaminic acid biosynthesis N-acetyl transferase {ECO:0000313|EMBL:KKU30247.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_
pseudaminic acid biosynthesis N-acetyl transferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_5

Not on your lists

comp(2108..2998)
DNA (891bp) protein (297aa)
Methyltransferase type 11 n=1 Tax=Methylomonas methanica (strain MC09) RepID=F9ZZF3_METMM
Methyltransferase type 11 {ECO:0000313|EMBL:KKU30248.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
type 11 methyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_6

Not on your lists

comp(3038..3670)
DNA (633bp) protein (211aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30249.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_7

Not on your lists

comp(3667..4461)
DNA (795bp) protein (265aa)
Acylneuraminate cytidylyltransferase n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DNP9_DESRL
Acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:KKU30250.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
acylneuraminate cytidylyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_8

Not on your lists

4572..5627
DNA (1056bp) protein (352aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30251.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_9
GWC2_OD1_45_7_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(5635..6969)
DNA (1335bp) protein (445aa)
Aminotransferase class-III {ECO:0000313|EMBL:KKU12668.1}; TaxID=1618621 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC2_45_7b.;"
Aminotransferase class-III id=4855661 bin=GWC2_Nitrospirae-rel_56_14 species=Sulfurimonas autotrophica genus=Sulfurimonas taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
class III aminotransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_10
GWC2_OD1_45_7_partial, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(6966..7925)
DNA (960bp) protein (320aa)
Putative dehydrogenase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C7F5_DESTA
Uncharacterized protein {ECO:0000313|EMBL:KKU12667.1}; TaxID=1618621 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC2_45_7b.;"
putative dehydrogenase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_11

Not on your lists

comp(7922..9064)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Anoxybacillus kamchatkensis RepID=UPI0002DBCCF5
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase {ECO:0000313|EMBL:KKU30254.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_G
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_12

Not on your lists

comp(9066..10046)
DNA (981bp) protein (327aa)
Polysaccharide biosynthesis protein CapD n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I5G6_DESAP
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:KKU30255.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
flagellin modification protein FlmA
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_13

Not on your lists

comp(10086..11216)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003660581
Uncharacterized protein {ECO:0000313|EMBL:KKU30256.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_14

Not on your lists

comp(11218..12678)
DNA (1461bp) protein (487aa)
Capsule polysaccharide biosynthesis domain protein n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0F6H2_9LEPT
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:KKU30257.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_15

Not on your lists

comp(12683..14464)
DNA (1782bp) protein (594aa)
ABC transporter related n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q10Y45_TRIEI
ABC transporter related protein {ECO:0000313|EMBL:KKU30258.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
ABC transporter-like protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_16

Not on your lists

comp(14446..15390)
DNA (945bp) protein (315aa)
putative uDP-glucose 4-epimerase (EC:5.1.3.2)
Putative UDP-glucose 4-epimerase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHF6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU30259.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_17

Not on your lists

comp(15387..16538)
DNA (1152bp) protein (384aa)
Predicted pyridoxal-phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TYY5_METKA
Aminotransferase DegT {ECO:0000313|EMBL:KKU30260.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
pyridoxal-phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_18

Not on your lists

comp(16573..17637)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Geobacillus sp. MAS1 RepID=V6VBN5_9BACI
Uncharacterized protein {ECO:0000313|EMBL:KKU30261.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
putative methicillin resistance protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_19

Not on your lists

comp(17619..18746)
DNA (1128bp) protein (376aa)
UDP-N-acetyl-D-glucosamine 2-epimerase (EC:5.1.3.14)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D9B9_9BACT
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing {ECO:0000313|EMBL:KKU30262.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_20
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(18743..19846)
DNA (1104bp) protein (368aa)
N-acetylneuraminate synthase (EC:2.5.1.57); K01654 N-acetylneuraminate synthase [EC:2.5.1.56] Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
N-acetylneuraminate synthase (EC:2.5.1.57)
N-acetylneuraminate synthase n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T756_THEIA
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_21

Not on your lists

comp(19822..20421)
DNA (600bp) protein (200aa)
Methyltransferase type 11 n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P0Y3_GRAMM
Methyltransferase type 11 {ECO:0000313|EMBL:KKU30264.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
type 11 methyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_22

Not on your lists

comp(20408..21118)
DNA (711bp) protein (237aa)
Acylneuraminate cytidylyltransferase n=1 Tax=Clostridium botulinum (strain Okra / Type B1) RepID=B1IK52_CLOBK
Acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:KKT28987.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
acylneuraminate cytidylyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_23

Not on your lists

comp(21111..22082)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA076-D02 RepID=UPI00036FDA72
Uncharacterized protein {ECO:0000313|EMBL:KKU30266.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_24
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(22072..22626)
DNA (555bp) protein (185aa)
sulfate adenylyltransferase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0736
Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein {ECO:0000313|EMBL:KKT60409.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibact
adenylylsulfate kinase ApsK
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_25
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(22638..24818)
DNA (2181bp) protein (727aa)
sulfate adenylyltransferase (EC:2.7.7.4); K00958 sulfate adenylyltransferase [EC:2.7.7.4] Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
sulfate adenylyltransferase (EC:2.7.7.4); K00958 sulfate adenylyltransferase [EC:2.7.7.4] id=14429082 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=bin3_NC10 organism_group=NC10
sulfate adenylyltransferase (EC:2.7.7.4)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_26

Not on your lists

24838..26343
DNA (1506bp) protein (502aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30269.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Uncharacterized protein id=4532011 bin=GWA2_OP3_52_12 species=Candidatus Nitrosoarchaeum koreensis genus=Candidatus Nitrosoarchaeum taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_27
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

26343..26465
DNA (123bp) protein (41aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_28

Not on your lists

26636..27133
DNA (498bp) protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30270.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_29

Not on your lists

comp(27068..28330)
DNA (1263bp) protein (421aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CZW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KKU30271.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
putative glycosyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_691_30

Not on your lists

28347..28733
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30272.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Displaying items 1-30 of 78 in total

View Taxonomy