ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_1
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

295..1668
DNA (1374bp) protein (458aa)
endonuclease Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Excinuclease ABC subunit C id=1915927 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
endonuclease
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_2

Not on your lists

1698..1916
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZMX6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKT28586.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
secG; preprotein translocase, SecG subunit
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_3

Not on your lists

1923..3503
DNA (1581bp) protein (527aa)
Extracellular solute-binding protein family 5, peptide/nickel transport system substrate-binding protein {ECO:0000313|EMBL:KKT28587.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcub
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein id=5803423 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
putative ABC transporter substrate binding protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_4

Not on your lists

3481..4260
DNA (780bp) protein (260aa)
glucose-6-phosphate isomerase, archaeal (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGH8_9FIRM
Glucose-6-phosphate isomerase {ECO:0000313|EMBL:KKU29671.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_5

Not on your lists

4375..4752
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8IHK7_ALIAT
Uncharacterized protein {ECO:0000313|EMBL:KKU29672.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_6

Not on your lists

4941..5240
DNA (300bp) protein (100aa)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DZA5_9BACT
Isopentenyldiphosphate isomerase {ECO:0000313|EMBL:KKU29674.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
NUDIX hydrolase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_7
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

5494..7437
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XGS0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKT60297.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
Zn-dependent hydrolase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_8

Not on your lists

comp(7460..7927)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29676.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_9
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

7998..9020
DNA (1023bp) protein (341aa)
tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
trpS; tryptophan--tRNA ligase TrpS (EC:6.1.1.2)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035FD2BB
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_10
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

9044..9730
DNA (687bp) protein (229aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Phosphoglycerate mutase family protein n=1 Tax=Megasphaera micronuciformis F0359 RepID=E2ZD03_9FIRM
phosphoglycerate mutase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_11

Not on your lists

comp(9734..11155)
DNA (1422bp) protein (474aa)
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3H3_SPHTD
Phosphomannomutase {ECO:0000313|EMBL:KKU29679.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_12

Not on your lists

11201..11857
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IP39_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKU29680.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_13

Not on your lists

11854..12852
DNA (999bp) protein (333aa)
GTP-binding protein YchF {ECO:0000313|EMBL:KKU29681.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
sen:SACE_0960 ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 id=8091 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
50S ribosome-binding GTPase family protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_14

Not on your lists


12872..13360
DNA (489bp) protein (163aa)
30S ribosomal protein S6 n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=RS6_DICT6
30S ribosomal protein S6 {ECO:0000313|EMBL:KKU29682.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
rpsF; 30S ribosomal protein S6
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_15

Not on your lists

13363..13809
DNA (447bp) protein (149aa)
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KKU29683.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
single-strand binding protein; K03111 single-strand DNA-binding protein id=5803295 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
single-strand binding protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_16
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


13793..14005
DNA (213bp) protein (71aa)
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 id=15190270 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
30S ribosomal protein S18
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_17

Not on your lists

13992..14357
DNA (366bp) protein (122aa)
Phosphoribosyltransferase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0W2_DICTD
Uncharacterized protein {ECO:0000313|EMBL:KKU29684.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
purine phosphoribosyltransferase-related protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_8248_18
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


comp(14354..15367)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZW1_9BACT
Protein RecA {ECO:0000313|EMBL:KKT60287.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
recA protein
Displaying 18 items

View Taxonomy