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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_1
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

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2..259
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT59472.1}; Flags: Fragment;; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
hypothetical protein id=5803242 bin=OD1_GWC2_34_28 species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_2
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(536..1207)
DNA (672bp) protein (224aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZY14_9BACT
Fic protein
Filamentation induced by cAMP protein Fic Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_3
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(1207..1404)
DNA (198bp) protein (66aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_4

Not on your lists

1973..2506
DNA (534bp) protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57039.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_5
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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2748..3320
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJD2_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_6
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(3328..4524)
DNA (1197bp) protein (399aa)
Putative uncharacterized protein PH1688 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O59312_PYRHO
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_7

Not on your lists

4584..5615
DNA (1032bp) protein (344aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.9 5.3.1.8)
Bifunctional phosphoglucose/phosphomannose isomerase {ECO:0000313|EMBL:KKT29215.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
Bifunctional phosphoglucose/phosphomannose isomerase id=3423624 bin=GWA1_ZB2_49_26 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_8
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

5714..5959
DNA (246bp) protein (82aa)
HTH ArsR-type DNA-binding domain Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
HTH ArsR-type DNA-binding domain id=5801689 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_9

Not on your lists

6076..6555
DNA (480bp) protein (160aa)
NLP/P60 protein {ECO:0000313|EMBL:KKT57043.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
Putative uncharacterized protein id=5801516 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
NLP/P60 protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_10

Not on your lists


6548..7678
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003827B7C
Uncharacterized protein {ECO:0000313|EMBL:KKT29212.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
Phenylalanyl-tRNA synthetase alpha chain
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_11
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

7675..8403
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FTU3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
peptidase C39 like family protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_12
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(8433..8858)
DNA (426bp) protein (142aa)
peptidase M23B Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Peptidase, M23 family id=1888604 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
peptidase M23B
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_13
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(8859..9053)
DNA (195bp) protein (65aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_14

Not on your lists

9239..9865
DNA (627bp) protein (209aa)
clpP; rATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease, proteolytic subunit ClpP n=2 Tax=mine drainage metagenome RepID=T1BBJ2_9ZZZZ
ATP-dependent Clp protease proteolytic subunit {ECO:0000313|EMBL:KKT57048.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_15
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

9843..10421
DNA (579bp) protein (193aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] id=14424046 bin=bin11_novelCP species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin11_novelCP organism_group=Unknown_CP
ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
ATP-dependent Clp protease, proteolytic subunit ClpP
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_16
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(10467..10886)
DNA (420bp) protein (140aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_17

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10981..12225
DNA (1245bp) protein (415aa)
Processing protease n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67P76_SYMTH
Processing protease {ECO:0000313|EMBL:KKT57051.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
processing protease
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_18

Not on your lists

12283..15171
DNA (2889bp) protein (963aa)
UvrABC system protein A {ECO:0000313|EMBL:KKT29204.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
UvrABC system protein A id=2670085 bin=GWA1_ZB2_49_26 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
UvrABC system protein A
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_19

Not on your lists

comp(15152..15385)
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57053.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_20
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

15624..16196
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003615D0F
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_21
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

16293..20477
DNA (4185bp) protein (1395aa)
endonuclease/exonuclease/phosphatase Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Uncharacterized protein id=4364523 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
endonuclease/exonuclease/phosphatase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_22
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

20545..21516
DNA (972bp) protein (324aa)
glyceraldehyde-3-phosphate dehydrogenase, type I; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000378059E
glyceraldehyde-3-phosphate dehydrogenase, type I
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_23

Not on your lists

21513..21821
DNA (309bp) protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57058.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_24

Not on your lists

21905..22099
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57059.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_25

Not on your lists

22096..22251
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57060.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_26

Not on your lists

22257..22661
DNA (405bp) protein (135aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57061.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_27

Not on your lists

22676..23191
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57062.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_28

Not on your lists

23283..23549
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57063.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_29
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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23546..23644
DNA (99bp) protein (33aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_2468_30

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23641..23925
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57065.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
Displaying items 1-30 of 65 in total

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