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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_1
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(182..370)
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_2
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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385..591
DNA (207bp) protein (69aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_3

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594..875
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000373B1FF
Uncharacterized protein {ECO:0000313|EMBL:KKU29597.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
plasmid stabilization system
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_4

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962..3637
DNA (2676bp) protein (892aa)
ATP-dependent chaperone ClpB {ECO:0000313|EMBL:KKU29598.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
id=5227216 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
ATP-dependent chaperone ClpB
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_5

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4239..4712
DNA (474bp) protein (158aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29599.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_6

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comp(4754..5896)
DNA (1143bp) protein (381aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29600.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_7

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comp(5901..8813)
DNA (2913bp) protein (971aa)
Conserved repeat domain protein {ECO:0000313|EMBL:KKU29601.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
alias=gwe2_scaffold_601_69 id=15190479 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_8

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comp(8810..9091)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037E2EEB
Uncharacterized protein {ECO:0000313|EMBL:KKT29164.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_9

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9143..11764
DNA (2622bp) protein (874aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29603.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_10

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11833..12453
DNA (621bp) protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29604.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein id=92115 bin=ACD61 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_11
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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12504..13136
DNA (633bp) protein (211aa)
L-isoaspartyl protein carboxyl methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curat
L-isoaspartyl protein carboxyl methyltransferase (EC:2.1.1.77)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000362AC96
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_12

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13137..13898
DNA (762bp) protein (254aa)
Aminodeoxychorismate lyase n=1 Tax=uncultured bacterium RepID=K1Y7R7_9BACT
Aminodeoxychorismate lyase {ECO:0000313|EMBL:KKT29168.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_13

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13941..14972
DNA (1032bp) protein (344aa)
glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Uncharacterized protein {ECO:0000313|EMBL:KKU29607.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_14

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15005..15313
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI000369A75F
Uncharacterized protein {ECO:0000313|EMBL:KKT29170.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
rpsP; 30S ribosomal protein S16
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_15
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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15373..15705
DNA (333bp) protein (111aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
UPF0109 protein LDC_0451 id=4790133 bin=GWC2_OD1_43_27 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_16

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comp(15778..16236)
DNA (459bp) protein (153aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29610.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_17

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16293..16994
DNA (702bp) protein (234aa)
tRNA (Guanine-N(1)-)-methyltransferase {ECO:0000313|EMBL:KKT29173.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
tRNA (guanine-N(1)-)-methyltransferase id=4790135 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
trmD; tRNA (guanine-N(1)-)-methyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_18

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comp(16978..17892)
DNA (915bp) protein (305aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT29174.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_19
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

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17928..19238
DNA (1311bp) protein (437aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000313|EMBL:KKT59735.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_2
UDP-N-acetylglucosamine 1-carboxyvinyltransferase id=4241929 bin=GWC2_OD1_43_27 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_20

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19270..19524
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT29176.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
Putative uncharacterized protein id=2603422 bin=GWB1_Berkelbacteria_38_5 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_21
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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19532..19750
DNA (219bp) protein (73aa)
YcfA family protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
YcfA family protein id=2073021 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_22

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19800..20816
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYT3_9BACT
Rod shape-determining protein mreB {ECO:0000313|EMBL:KKT29177.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
rod shape-determining protein MreB
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_23

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20881..21387
DNA (507bp) protein (169aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunits gamma and tau n=1 Tax=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) RepID=A7HJR0_FERNB
Polymerase III, subunit gamma and tau protein {ECO:0000313|EMBL:KKT29178.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_24

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21387..21938
DNA (552bp) protein (184aa)
Ribosome recycling factor {ECO:0000313|EMBL:KKU29617.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
ribosome recycling factor; K02838 ribosome recycling factor id=17368 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
frr; ribosome recycling factor
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_25

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21943..22998
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000364C39C
Membrane-associated zinc metalloprotease {ECO:0000313|EMBL:KKT29180.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
membrane-associated zinc metalloprotease
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_26

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23018..24244
DNA (1227bp) protein (409aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29619.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Proline--tRNA ligase id=2150695 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
Prolyl-tRNA synthetase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_27
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

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24256..25308
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FJA9_9BACT
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:KKT59742.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.
rod shape-determining protein MreB
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_28

Not on your lists

25442..26032
DNA (591bp) protein (197aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29621.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_29
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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26025..26318
DNA (294bp) protein (98aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_1352_30
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

26296..27978
DNA (1683bp) protein (561aa)
putative penicillin-binding protein; K05515 penicillin-binding protein 2 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
penicillin-binding protein 2; K05515 penicillin-binding protein 2 id=5803382 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
putative penicillin-binding protein
Displaying items 1-30 of 38 in total

View Taxonomy