ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_13

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: 9914..10300

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 {ECO:0000313|EMBL:KKT60001.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 128.0
  • Bit_score: 251
  • Evalue 7.40e-64
30S ribosomal protein S13 id=3013113 bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 129.0
  • Bit_score: 186
  • Evalue 2.10e-44
rpsM; 30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 128.0
  • Bit_score: 156
  • Evalue 3.80e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA1_OD1_44_25 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGGTTAGAATCGCAGGAGTAAATATTCCGGATAACAAAAAGATACCAGTCGCGCTGTCGTATATTTACGGCGTGGGACAGCCTTTGGCTCTGAAAATTTTAATGTCCGCGAAGGTGGATCCGAAAAGGCGCGCCAAAGATTTGTCGTCCCAAGAAGTCGGGAGGCTCCGCGACATTATTGAAAAAGACCATAAAGTTGAAGGCGAACTTAGGCGCGAAATAATTTTAAATATTAAAAGATTAAAAGATATTAAGTCGTACCGCGGGCTTCGGCATGCGCGCGGTTTGCCAACCAGAGGCCAGCGGACAAAGACCAATTCGCGCACGAGGCGCGGCAATGTCCGCAAAACAATGATGTCTGGCAAACGCAAACTGGAGAAAAAATAA
PROTEIN sequence
Length: 129
MVRIAGVNIPDNKKIPVALSYIYGVGQPLALKILMSAKVDPKRRAKDLSSQEVGRLRDIIEKDHKVEGELRREIILNIKRLKDIKSYRGLRHARGLPTRGQRTKTNSRTRRGNVRKTMMSGKRKLEKK*