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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_1

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172..441
DNA (270bp) protein (90aa)
ArsR family transcriptional regulator {ECO:0000313|EMBL:KKU30107.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_2

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comp(543..875)
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30108.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_3

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943..2121
DNA (1179bp) protein (393aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000313|EMBL:KKT29613.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
tRNA-specific 2-thiouridylase MnmA id=4242101 bin=GWC2_OD1_43_27 species=Bacillus cellulosilyticus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_4

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2124..3878
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003805103
Alanine-tRNA ligase {ECO:0000313|EMBL:KKU30110.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Alanine-tRNA ligase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_5

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comp(3956..4525)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003615D0F
Uncharacterized protein {ECO:0000313|EMBL:KKU30111.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
phaN; repressor
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_6

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comp(4755..5060)
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30112.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_7

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5244..6557
DNA (1314bp) protein (438aa)
Acetylornithine aminotransferase {ECO:0000313|EMBL:KKU30113.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
4-aminobutyrate aminotransferase
Acetylornithine aminotransferase id=1800766 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured planctomycete genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_8

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6601..7746
DNA (1146bp) protein (382aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30114.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_9
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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7740..9032
DNA (1293bp) protein (431aa)
seg Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
seg id=5803403 bin=OD1_GWC2_34_28 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_10

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9049..9264
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30116.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_11

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9248..9517
DNA (270bp) protein (90aa)
Plasmid stabilization system n=1 Tax=sediment metagenome RepID=D9PI74_9ZZZZ
Plasmid stabilization system {ECO:0000313|EMBL:KKU30117.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RelE/StbE family addiction module toxin
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_12
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

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9573..9794
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000360E515
Translation initiation factor IF-1 {ECO:0000313|EMBL:KKT60000.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
translation initiation factor IF-1
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_13
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

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9914..10300
DNA (387bp) protein (129aa)
30S ribosomal protein S13 {ECO:0000313|EMBL:KKT60001.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
30S ribosomal protein S13 id=3013113 bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rpsM; 30S ribosomal protein S13
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_14

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10483..10917
DNA (435bp) protein (145aa)
30S ribosomal protein S11 n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI00036D75F5
Ribosomal protein S11 {ECO:0000313|EMBL:KKT29602.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
rpsK; 30S ribosomal protein S11
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_15
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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10914..11522
DNA (609bp) protein (203aa)
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
30S ribosomal protein S4 id=3013123 bin=GWC1_OD1_38_17 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
30S ribosomal protein S4
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_16
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

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11540..12442
DNA (903bp) protein (301aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKT60004.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
DNA-directed RNA polymerase subunit alpha id=3013128 bin=GWC1_OD1_38_17 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
DNA-directed RNA polymerase subunit alpha
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_17
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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12453..12791
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035D107D
rplQ; 50S ribosomal protein L17 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
rplQ; 50S ribosomal protein L17
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_18
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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12799..13158
DNA (360bp) protein (120aa)
50S ribosomal protein L13 n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HGJ3_9BACL
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
50S ribosomal protein L13
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_19

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13142..13588
DNA (447bp) protein (149aa)
30S ribosomal protein S9 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035CD22E
30S ribosomal protein S9 {ECO:0000313|EMBL:KKU30125.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
rpsI; 30S ribosomal protein S9
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_20

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13683..13868
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30126.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_21

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13904..14128
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU30127.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Displaying 21 items

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