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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_9569_16

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: 11540..12442

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKT60004.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 300.0
  • Bit_score: 576
  • Evalue 3.10e-161
DNA-directed RNA polymerase subunit alpha id=3013128 bin=GWC1_OD1_38_17 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 313.0
  • Bit_score: 315
  • Evalue 5.40e-83
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 295.0
  • Bit_score: 262
  • Evalue 2.00e-67

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Taxonomy

GWA1_OD1_44_25 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGGATTACGAAATTGTTTTGCCGTCGCACACCCGAGTTGTTTCTGAAGAGGAACAGAAGGGCACTTATGAAATAGACAGCCTTTATCCGGGCTACGGGCACACATTGGGCAATTCTTTGCGCCGCATTTTACTTTCTTCTTTGCCCGGCGCCGCGGTGACCAAAGTAAAAATAGAAGGGGCTAGCCACGAATTCACCACACTTCCAGGTATTTTGGAAGACGTGGTGACGATTTTGCTTAATATAAAACAACTGCGTTTTAAGCTTCACGGCGAAGGTCCTGAAACTGCCACACTGGAAGTCAAAGGCGCCAAAGAAGTGAGGGGTAAGGATATCAAATGCCCGACGCAACTGGAAGTGTTGAATAAAGATTTGCATATTGCGACACTGACAGAGAAAAATTCGCGTCTCTCAATAGAGTTTACTGTTGAGCGTGGCATGGGCTTTGTGCCTTCCGAGGAGCTGATGAAAGACAAGGTGTCCGTGGGCGTGCTGGTGCTAGACGCGATATTTACGCCTATAAGGCGCGTAACTTACGAAATTGAGAACATGCGCGTCGGCGACCGAACCGACTATAACCGATTGAGGCTTTTTATTGAAACCGATGGCACGCTTTCTCCGCGGGAAGCCTTAAAATGCGCTTTGGCGGTTATGCGGAAACAAATTGAGCAGATTGAAACTTTTGAAGGCGAGATGGCTGCCATCGGTGCGGAGCAAACCGAAACAAAAATGAAATTGTCAGCCAGAACAAGTAAGGCTTTGGCTGCCGCCGGCCTTAGCTCGCCGGAGGCGCTCGCCCAAAAATCGGAGGCAGAAATTAAAGAACTTGAAGGAATAGGCGATAAAGCGGTTTCTGAAATAAGGAAAGCGTTGGCGAAATTGGGATTAGCATTAAAAGAATAA
PROTEIN sequence
Length: 301
MDYEIVLPSHTRVVSEEEQKGTYEIDSLYPGYGHTLGNSLRRILLSSLPGAAVTKVKIEGASHEFTTLPGILEDVVTILLNIKQLRFKLHGEGPETATLEVKGAKEVRGKDIKCPTQLEVLNKDLHIATLTEKNSRLSIEFTVERGMGFVPSEELMKDKVSVGVLVLDAIFTPIRRVTYEIENMRVGDRTDYNRLRLFIETDGTLSPREALKCALAVMRKQIEQIETFEGEMAAIGAEQTETKMKLSARTSKALAAAGLSSPEALAQKSEAEIKELEGIGDKAVSEIRKALAKLGLALKE*