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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_31886_8

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: 4692..5831

Top 3 Functional Annotations

Value Algorithm Source
rpfA; 30S ribosomal protein S1 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 379.0
  • Bit_score: 746
  • Evalue 2.20e-212
RNA binding S1 domain protein id=2933970 bin=GWC1_OD1_38_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 373.0
  • Bit_score: 387
  • Evalue 1.80e-104
rpfA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 370.0
  • Bit_score: 265
  • Evalue 2.30e-68

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Taxonomy

R_OD1_Giovannonibacteria_45_140 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1140
ATGGCAACGATTACAGCAGAAACAGATATAAAACCCGGCAACCATATAATGGAGGCGCTTTTGAGAACGCAGCCTAAGGTGTTTTTAAAAATCGGCGATCTTATAGAAGGATCCCTGCTCGGCCGCAAGGGCGCCAAGATATTTTTGGATTTGGGCGTGTACGGCACCGGCACTATTTATGGCAAAGAGTACCAAAACGCCAGAGAGATTATTAAAAATTTGAAGTTGGGAGATAAGGTCACCGCCAAAGTGGTTGAACTGGAAAACAAAGACGGCCTCATTGAGCTTTCACTGAAAGAAGCCGGATCGGATATGGTATGGAAAGACGCCAAAGAACTCAAAGAATCGCAGGAAACTCTTAATCTGAAGGCGCTGGAAGCAAACAAGGGTGGGCTGGTCTTGGAATGGCGCGGCATTAAAGGTTTTTTGCCCGCCTCGCAGCTCAAAGCTTCGCACTACCCGCGAGTTGAGGGCGGAGACAAGACTAAAATTTTTGACGAACTTAAAAAATTGGTTGGTGAAAACATGACCGTCACCATTCTTGATTTTGAGCCCAAAGAAAACAAACTTATTTTTTCAGAAAAAGGCACGGAATCGGAGGATCTCAAAAGGGTGGTTGAAAAGTACAAAGTCGGCGATATAATTGAGGGCGATATTACGGGGGTAGTTGATTTTGGAATTTTTATAAAAATAGAAGAAGGACTTGAGGGCCTCGCCCACATCTCGGAGCTTGATTGGGCTTTGGTGGAAAATCCGAATTCGCTTTTTAAAATCGGGGAAAAAGTTAAAGCCCAAATCATCTCAATTGAAGGAGACAAAATCTCGCTTTCCGTAAAAGCGTTAAAACCAAATCCGTGGGAAGTAAATAAAGAAAAGTATAAAAAAGGAGACATCGTGGAAGGCAAGGTCCTGCGGCTCAACAAATTCGGCGCATTGGTGACTTTGGACACCGGCATCTACGGACTGGCGCACATTTCCGATTTTGGCACCGAGAAAAAAATGCGCGAAACAATAGATGCAGGCAAAACCTATGTTTTTCAGATAGTAAATTACAAACCGGAAGACAAAAAGCTCTCATTTTCTCTGTTGGGTAAACCCGGTGAGGCTCCGAAAACTCCGCAGACCGAAGCGCAAGAATAA
PROTEIN sequence
Length: 380
MATITAETDIKPGNHIMEALLRTQPKVFLKIGDLIEGSLLGRKGAKIFLDLGVYGTGTIYGKEYQNAREIIKNLKLGDKVTAKVVELENKDGLIELSLKEAGSDMVWKDAKELKESQETLNLKALEANKGGLVLEWRGIKGFLPASQLKASHYPRVEGGDKTKIFDELKKLVGENMTVTILDFEPKENKLIFSEKGTESEDLKRVVEKYKVGDIIEGDITGVVDFGIFIKIEEGLEGLAHISELDWALVENPNSLFKIGEKVKAQIISIEGDKISLSVKALKPNPWEVNKEKYKKGDIVEGKVLRLNKFGALVTLDTGIYGLAHISDFGTEKKMRETIDAGKTYVFQIVNYKPEDKKLSFSLLGKPGEAPKTPQTEAQE*