ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_31886

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_31886_1

Not on your lists

comp(197..715)
DNA (519bp) protein (173aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT55429.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_31886_2

Not on your lists

comp(775..2769)
DNA (1995bp) protein (665aa)
DNA ligase, NAD-dependent (EC:6.5.1.2)
Ligase protein {ECO:0000313|EMBL:KKT55430.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
DNA ligase id=3594477 bin=GWA1_ZB2_49_26 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_31886_3

Not on your lists

comp(2944..3192)
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT55431.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
hypothetical protein
Uncharacterized protein id=4870077 bin=GWA2_CPR4_42_17 species=Sulfurospirillum barnesii genus=Sulfurospirillum taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_31886_4

Not on your lists

comp(3189..3404)
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT55432.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
hypothetical protein id=119872 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_31886_5
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(3401..3547)
DNA (147bp) protein (49aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_31886_6
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(3726..3956)
DNA (231bp) protein (77aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_31886_7
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(3974..4654)
DNA (681bp) protein (227aa)
Zn-dependent hydrolase of the beta-lactamase fold-like protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Zn-dependent hydrolase of the beta-lactamase fold-like protein id=2934030 bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Zn-dependent hydrolase of the beta-lactamase fold-like protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_31886_8
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

4692..5831
DNA (1140bp) protein (380aa)
rpfA; 30S ribosomal protein S1 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RNA binding S1 domain protein id=2933970 bin=GWC1_OD1_38_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rpfA; 30S ribosomal protein S1
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_31886_9
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(5840..6820)
DNA (981bp) protein (327aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Displaying 9 items

View Taxonomy