ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_3550_1

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: comp(1769..2521)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TrmB {ECO:0000313|EMBL:KKU29881.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 250.0
  • Bit_score: 486
  • Evalue 2.70e-134
Transcriptional regulator, TrmB id=1955928 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 246.0
  • Bit_score: 244
  • Evalue 9.70e-62
Transcriptional regulator, TrmB similarity KEGG
DB: KEGG
  • Identity: 31.7
  • Coverage: 249.0
  • Bit_score: 126
  • Evalue 1.10e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGTTGGACGAACTAAAAAAGATTGGGCTCTCGGAGAACGAGGCGAGGGTGTATCTCGCGCTTTTGGAATTAGGGTCGGAAACTGCGCAGGAGATTGCTAAAAAAGCCGCGGTAAAACGCGCAACAACTTATGTGCAATTGGAAGCTCTTATGAAAAAAGGGCTGGTAACCTCGTTTGAGAAAGGAAAGAAAAGTTATTTCCGCGCAGAAGATCCGGAGCATTTAATTAAAATCGCCGAGCGAGAAAAAAAAATGGCCAGAGAACGCGAGAGCGCGCTGGAAGAAATCCTGCCCGGCCTCGGTAAGCTTTACATTTCCTCCGGCGAGCGCCCGAGGGTGAGATTTTTTGAAGGAGTAGAGGGTCTGCGGACAATGCAAGATGAGTTTTTAAAAACGAAAGAAAAAGAAGCTTTGGGTTTTTCCTCCGCAGACGATATTTTAAGAATATTTCCATCTCACCCAGCAGAGTATTCTCCGCGAAGAGTAAGGCGCGGAATACATTCTAAATTAATCTATACCAGCTCGCGCGGAAAAATTTTAAAAAAACAAGACGACGAATTGCTCCGCGAGGCACGCTATATTCCGGCCGATAAATTTCCTTTTACTTGTGATGTTGCGGTATACGGAAATAGAGTAGCCATATCCGCCTTAAGAAAAAACCCGATCGGAGTCATTATTGAAAGTGAGGAAATTGCCGATTCTCTAAAAACAATTTTTAATCTCGCCTGGGAAGCAACAGAAAAATATAATTAA
PROTEIN sequence
Length: 251
MLDELKKIGLSENEARVYLALLELGSETAQEIAKKAAVKRATTYVQLEALMKKGLVTSFEKGKKSYFRAEDPEHLIKIAEREKKMARERESALEEILPGLGKLYISSGERPRVRFFEGVEGLRTMQDEFLKTKEKEALGFSSADDILRIFPSHPAEYSPRRVRRGIHSKLIYTSSRGKILKKQDDELLREARYIPADKFPFTCDVAVYGNRVAISALRKNPIGVIIESEEIADSLKTIFNLAWEATEKYN*