ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_3550_13

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: comp(13120..14586)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions 7..24 Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 488.0
  • Bit_score: 955
  • Evalue 2.30e-275
transmembrane_regions 7..24 id=133103 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1 similarity UNIREF
DB: UNIREF100
  • Identity: 25.8
  • Coverage: 411.0
  • Bit_score: 108
  • Evalue 2.10e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_Giovannonibacteria_45_140 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1467
ATGGATTATAAAAAAAACTTTTTGAAAACGTTTGTTGCAATCTCACTCATTTTAACTTTTGGGACTAGTCTGGTGATGCCTAGTTTTGTGTTCGCAATAGAAATAACAGGAGAAGAAGGATTCAACGAACCGATTAGCGGAGGCGGCGGTATAGGAGATATTTTTGGCGGTTTGGGCAGTCTTTTGGGACTTGTGTCCGGAGGGAATTTTGTGCCAATAGCCAAGGTGCAGGATAGACCGGGCACTTTGAAGGACATGGCAAATGACATGGCTTGGAGCGTTGCTAAACTCATGGTGCACAGGATTACACAAGATATTGTTAATCTAATCCGCACCGGCGGACAAGGGGGGGCGCCGCTTTTTGTGCAGGATTGGAAGGGTTTTTTGCTTGACGCGGCGGACCAGGCAAGCGGAGTGTTTTTGAAGGAATTAAATTTCACACAGCTTTGCGAACCGTTCGGACCAAGACTCCGGCTTATTTTTGCCAGCGGGAGAAGGTCAATGCAGGAAAGATTCAGATGCACAGTATCGGCGGTGGCCGGAAATCTGCAAAGCTTTTTTACCGATTTCAACAACGGGGGATGGCAAAGATGGATTGAGCTTACGCAAACGCAAAGTAATCCATATGTATCCTTCTTAGGACTTGCCGCAGAAAAAGAAAAAAGGGAGGCAATCGCAGTACAAGCAAAACTCAACGAGGCCGTGTCCGCCAACGGATTTTTGGGAATAGAAGACTGCAGTCAGGCCGGACCGACGAAAGAAACCGATGTCGGGGATCAGCCGATCGGAAACGTGTGTCCCATCGTAACCCCGGGCAAATATCTGGAAAACCGGCTGGCAAAAGCCACAAATTCGGACATTGAACAGCTTAACCTTGCCGACTCATTTAATGAAATTTTAATCGCGGCGTTTCAGTCTATGATCAACGGATTATTCTTCGCGCCGGGCGGGCTTTCCAGTTCAAATATTTACTCAACCACCATCACCAACCAGCTCCAGCAGGACTTGGACAATCTCAAACGCAGCGGCATCCAGCTTTCCGGGATTGATTCGGCAATAAACATTACTCAATCAATAATTGATAAAAAGGAAGATTCGCTGGCAAAAATAAAAGACGAAATTATCGTTTTAGGAAAACTCAAGACGTGCAAACAAGACAAAAGCGAACCGATAAGCGATGTAAATAATAAAATTCAAACAGCTACCACCACGAAGGCGGCGCTGGAGGGGAATATTATAGACCAGACAATTTTCATTGAGCTCTTAAAAGACGACCGCGCCGATCTTTTGCTTGCCCAAACAATTGAGCAGTTTAATCTAATGCTGCAGAAAATCGCCACGGATGTGGCGAAAACGAAATCGCTCGCAGAGGCAGTTTCCGAAAACGAGCAGATCGCAGCGGACAAATCGCAGGCCGAAGAAGATTTACAAAACTGCTTAAACCCGCCGGGCAATGTCATTGAATAA
PROTEIN sequence
Length: 489
MDYKKNFLKTFVAISLILTFGTSLVMPSFVFAIEITGEEGFNEPISGGGGIGDIFGGLGSLLGLVSGGNFVPIAKVQDRPGTLKDMANDMAWSVAKLMVHRITQDIVNLIRTGGQGGAPLFVQDWKGFLLDAADQASGVFLKELNFTQLCEPFGPRLRLIFASGRRSMQERFRCTVSAVAGNLQSFFTDFNNGGWQRWIELTQTQSNPYVSFLGLAAEKEKREAIAVQAKLNEAVSANGFLGIEDCSQAGPTKETDVGDQPIGNVCPIVTPGKYLENRLAKATNSDIEQLNLADSFNEILIAAFQSMINGLFFAPGGLSSSNIYSTTITNQLQQDLDNLKRSGIQLSGIDSAINITQSIIDKKEDSLAKIKDEIIVLGKLKTCKQDKSEPISDVNNKIQTATTTKAALEGNIIDQTIFIELLKDDRADLLLAQTIEQFNLMLQKIATDVAKTKSLAEAVSENEQIAADKSQAEEDLQNCLNPPGNVIE*