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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_10

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: comp(7731..8948)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilin {ECO:0000313|EMBL:KKT59818.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 405.0
  • Bit_score: 769
  • Evalue 3.40e-219
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=5803078 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 406.0
  • Bit_score: 382
  • Evalue 6.30e-103
type IV pilin similarity KEGG
DB: KEGG
  • Identity: 34.2
  • Coverage: 403.0
  • Bit_score: 263
  • Evalue 1.20e-67

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Taxonomy

GWA1_OD1_44_25 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGCAGTTTAATTACAAAGCCAGGACCGGTGAGGGAGAGGGGACGGAGGGGACGATTGAGGCCGCGAGCCTTGATTTGGCAGTTGCGTCTCTTCAGCGGCGCAATTTTTTGGTAATTTCCATTGAGCCGGTGGAAGAAGCGGCCGGTGTTATCGGCAGGGTCGCGGAGTGGTTTGGAATCTTTGAAAGAATACCGGGTGAAACTATAGTTATTTTGACAAGGCAGCTCTCTACGCTTTTTGAAGCCAAAGTGCCTATCGTGGAGTCGCTCAAAATTCTAATAGGCGAGGTTGACAATAAGAGGCTTCGCCGGCACATCTCCGACTTGCTGGACGATATTCAGGGCGGTATGGCGATGTCGCAGGCGATGGCGCGGCATCCGGAGGTTTTCTCGCGCTTTTATGTTGCGATGGTGAGATCCGGCGAAGAGTCTGGAAAGCTTGAAGAAATATTCGGATTTTTGGCGGACTATCTGGAGCGGAATTTTGAACTTGTTAGAAAGGCGCGCAACGCCTTAATTTATCCGGCGTTCGTGCTCTCAACCTTTATTGTTGTTATGTCTCTTATGCTTGTTTTTGTAATTCCGGGTTTGGCCGATATTTTGCTTGAGTCCGGCCAAGCCATTCCGGTTTACACACGCGCCGTTATAGGCATAAGTTCGTTTTTGAGAAGTTTCGGGTTGGTGTTTTTGGCGCTTTTGGCTGTGGCAGGAGTGTTTTTGGCGCGTTATGCGCGGACGGAGAGCGGAAAAGTGTATTTTGCGCGCCTCACGATTTCCACACCGCTCATCGGCGGGCTTTATAAAAAAATTTATCTTTCCAGAATCGCCGACAACCTTCACACCTTGCTTTCGGGGGGCATAACAGTTGTCCGGGCGCTTGAGATTACTTCGGAAGTCGTCGGAAATGAAATTTACCGCAGGATTCTTTTAGATTCAATGGAAACGGTTAAGGGCGGCAGTATGATCTCCGATGCTTTAGGTAAATACGAAGACGTTCCGCCGTTGCTTTCCCAGATGATCCGCATCGGAGAAGAAACGGGCCGGCTTGACCACATTTTAAACAGCGTTGCCAATTTTTACAGGCGGGATGTGGATAGCTTTATAGATAATCTGGTCAGCCTTATTGAGCCTGTTTTAATCGTTGCACTTGGTTTGGGCGTGGGGTTTTTGGTGGCGGCGGTGCTGGTGCCAATTTATAACATATCCACAGCCTTCTAA
PROTEIN sequence
Length: 406
MQFNYKARTGEGEGTEGTIEAASLDLAVASLQRRNFLVISIEPVEEAAGVIGRVAEWFGIFERIPGETIVILTRQLSTLFEAKVPIVESLKILIGEVDNKRLRRHISDLLDDIQGGMAMSQAMARHPEVFSRFYVAMVRSGEESGKLEEIFGFLADYLERNFELVRKARNALIYPAFVLSTFIVVMSLMLVFVIPGLADILLESGQAIPVYTRAVIGISSFLRSFGLVFLALLAVAGVFLARYARTESGKVYFARLTISTPLIGGLYKKIYLSRIADNLHTLLSGGITVVRALEITSEVVGNEIYRRILLDSMETVKGGSMISDALGKYEDVPPLLSQMIRIGEETGRLDHILNSVANFYRRDVDSFIDNLVSLIEPVLIVALGLGVGFLVAAVLVPIYNISTAF*