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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_1

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comp(1..2502)
DNA (2502bp) protein (834aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] id=5803528 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Gyrase subunit A protein {ECO:0000313|EMBL:KKT57566.1}; Flags: Fragment;; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
GyrA; DNA gyrase subunit A
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_2

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2624..3316
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BSJ1_9BACT
Transpanse {ECO:0000313|EMBL:KKT57565.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_3
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(3348..3782)
DNA (435bp) protein (145aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_4

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comp(3779..4315)
DNA (537bp) protein (179aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57563.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
Putative uncharacterized protein id=4731757 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_5

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comp(4317..4808)
DNA (492bp) protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57562.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
seg id=5803073 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_6

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comp(4809..5408)
DNA (600bp) protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57561.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_7

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comp(5416..6237)
DNA (822bp) protein (274aa)
Type 4 prepilin-like protein leader peptide-processing enzyme {ECO:0000313|EMBL:KKT30106.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
Prepilin peptidase id=4731760 bin=GWC2_OD1_43_27 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
prepilin signal peptidase PulO-like peptidase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_8

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6308..6979
DNA (672bp) protein (224aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57559.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
hypothetical protein id=15190343 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
transposase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_9

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comp(7105..7656)
DNA (552bp) protein (184aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57558.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
Tfp pilus assembly protein PilE-like id=4731762 bin=GWC2_OD1_43_27 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_10
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(7731..8948)
DNA (1218bp) protein (406aa)
Type IV pilin {ECO:0000313|EMBL:KKT59818.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=5803078 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type IV pilin
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_11
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(9131..10198)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000373007F
twitching motility protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
twitching motility protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_12
GWC2_OD1_45_7_partial, Azambacteria, Parcubacteria, Bacteria

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comp(10201..10575)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037FEA68
Response regulator {ECO:0000313|EMBL:KKU13081.1}; TaxID=1618621 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC2_45_7b.;"
Two component transcriptional regulator, winged helix
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_13

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comp(10580..12292)
DNA (1713bp) protein (571aa)
Type IV pilus assembly protein PilB {ECO:0000313|EMBL:KKT30100.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
general secretion pathway protein E id=5803081 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type IV pilus assembly protein PilB
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_14

Not on your lists

12389..12616
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57553.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_15

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comp(12691..13335)
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=uncultured SUP05 cluster bacterium RepID=D0U4B2_9GAMM id=130478 bin=ACD7 species=uncultured SUP05 cluster bacterium genus=unknown taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:KKT30098.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
transposase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_16

Not on your lists

comp(13390..13659)
DNA (270bp) protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57551.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_17

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comp(13656..14219)
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57550.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
transmembrane_regions id=5227302 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_18

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comp(14216..14746)
DNA (531bp) protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57549.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_19

Not on your lists

comp(14802..15920)
DNA (1119bp) protein (373aa)
Type IV pilus biogenesis protein PilM {ECO:0000313|EMBL:KKT30094.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
Type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=5803086 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
pilM; type IV pilus biogenesis protein PilM
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_20

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15959..16756
DNA (798bp) protein (266aa)
Phosphoribosyltransferase {ECO:0000313|EMBL:KKT57547.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
ComF family protein id=4095023 bin=GWF2_CPR3_35_18 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWF2_CPR3_35_18 organism_group=CPR3
putative amidophosphoribosyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_21
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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16771..17763
DNA (993bp) protein (331aa)
ABC transporter substrate binding protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
hypothetical protein
Putative uncharacterized protein id=3219593 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus taiwanensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_22

Not on your lists

comp(18063..18317)
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57545.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_23

Not on your lists

comp(18331..18585)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000365E383
Uncharacterized protein {ECO:0000313|EMBL:KKT30090.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_24
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(18591..18737)
DNA (147bp) protein (49aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_25

Not on your lists

19089..19574
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FIC2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKT57543.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_26

Not on your lists

comp(19733..19990)
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57542.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_27

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20077..20313
DNA (237bp) protein (79aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57541.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_28

Not on your lists

20285..20542
DNA (258bp) protein (86aa)
Addiction module toxin, RelE/StbE family n=1 Tax=mine drainage metagenome RepID=T1C4E1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKT57540.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_29
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

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20556..22793
DNA (2238bp) protein (746aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] id=5803096 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:KKT59800.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_30

Not on your lists

comp(22802..23203)
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT57538.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
Displaying items 1-30 of 47 in total

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