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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_13

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: comp(7746..8969)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKU29561.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 407.0
  • Bit_score: 790
  • Evalue 1.10e-225
RNA polymerase sigma factor id=2823713 bin=GWC1_OD1_38_17 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 410.0
  • Bit_score: 492
  • Evalue 4.30e-136
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 372.0
  • Bit_score: 396
  • Evalue 7.00e-108

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Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1224
ATGACAAAAAAGCAAAAAATCAAAAAAAAGAAGCTGTCTAAAAAAGCCGCGATCAAATCAAAAAAGCCGGCGCGGAGTGCCGTGCCCCTGAAGCCCACAAAAGCGGAACTCAAAAAAGAATTCAGCGAAGAAAAAGTTGATGCGCTTTTAAAAAAAGGCAAAGAGCGCGGTTTCCTGACCTACCCGGAGATTTTGGCAGCTTTTCCTCATATTGAATACAGCGTAATTTTTTTGGAGGATCTTTACTCGCGCATGGATGCTGCCGGAGTTGATATTTTGGAAGGAAAAGAACTTTTGGAAATCGCGCCGCCGCCTTTGGCCGGCGAACCTGTAGGTAAAGGAAAGGCAAAGAGAAAATCGCGAGAGCGCGCGCTGGCTTTGGATCAGGAAATCACGGCGGCGGATTCGGTACAAATGTATCTGAAAGAAATAGGCAGAATTCAGCTTATTTCCGGCGAAGAAGAAAAAGAGCTCGCCAGAAAGATTGAAGCGGGAGACGAGGATGCCAAAAACCGCTTGGCGCAAGCCAACTTGCGTTTGGTAGTTTCCATTGCGAAAAAATACGTCGGGCGGACGCCGAACCTGACAATGCTTGACTTGATTCAAGAGGGCAATTTGGGGCTATTCCGCGCAGTGGAAAAATTTGATTGGCGGAAGGGCTATAAATTTTCCACTTATGCCACTTGGTGGATCAGGCAGGCAGTCACGCGAGCAATCGCTGATCAGGGAAAAACAATCCGCATTCCGGTGCACATGGTGGAAACAATTTCAAAATACCAGCAGGTCAGGCGGCGCCTTACGCAGGATTTGGGAAGAGACCCGTTGGCAGAGGAGTTGGCTGCGGAGATGAACGTTGATGTGGAAAAGATACATCATATCCAGAAAATTTCGCAGGACACCGTGTCTTTGGAGGCGCCTGTTGGGGAAGACGACGAAGATTCGGTTTTGGGCGATTTTATTGAAGACGAAAAAATGCTTACTCCGGCACAGGAAGCCGCCAGAAAACTTTTAAAAGACCACATCAAAGAAATTTTGGTTGATCTGATGCCAAGGGAGCAGAAAATACTCCGTATGCGTTTTGGTTTGGATGACGGCATTACGCATACTTTGGAGGAAGTTGGTGCGGAGTTCGGCGTTACTCGCGAGCGCATCCGGCAGATTGAAGCCAAGGCTTTGGAAAAAATCCGCCAGCACCACAAAGTCATAAAATTGTATGAGTATTAA
PROTEIN sequence
Length: 408
MTKKQKIKKKKLSKKAAIKSKKPARSAVPLKPTKAELKKEFSEEKVDALLKKGKERGFLTYPEILAAFPHIEYSVIFLEDLYSRMDAAGVDILEGKELLEIAPPPLAGEPVGKGKAKRKSRERALALDQEITAADSVQMYLKEIGRIQLISGEEEKELARKIEAGDEDAKNRLAQANLRLVVSIAKKYVGRTPNLTMLDLIQEGNLGLFRAVEKFDWRKGYKFSTYATWWIRQAVTRAIADQGKTIRIPVHMVETISKYQQVRRRLTQDLGRDPLAEELAAEMNVDVEKIHHIQKISQDTVSLEAPVGEDDEDSVLGDFIEDEKMLTPAQEAARKLLKDHIKEILVDLMPREQKILRMRFGLDDGITHTLEEVGAEFGVTRERIRQIEAKALEKIRQHHKVIKLYEY*