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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_1
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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135..506
DNA (372bp) protein (124aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_2
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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566..1069
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000371892C
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_3
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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1074..1775
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037B95B7
cytochrome c biogenesis protein, transmembrane region Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
cytochrome c biogenesis transmembrane protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_4

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1779..2138
DNA (360bp) protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29553.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_5

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2143..3054
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036C8377
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKT29068.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_6

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3118..3378
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT29067.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_7

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3399..5405
DNA (2007bp) protein (669aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000373872C
Uncharacterized protein {ECO:0000313|EMBL:KKU29556.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_8
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

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5456..5839
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT59263.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
Putative membrane protein id=2670049 bin=GWA1_ZB2_49_26 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_9

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5841..6299
DNA (459bp) protein (153aa)
Phospholipid-binding protein, PBP family {ECO:0000313|EMBL:KKU29558.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Putative uncharacterized protein id=3572161 bin=GWF2_OP3_43_52 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
PEBP family protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_10

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6359..6913
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29559.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_11

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6955..7410
DNA (456bp) protein (152aa)
Membrane protein-like protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NMA9_ROSCS
Membrane protein-like protein {ECO:0000313|EMBL:KKU29560.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_12
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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7463..7687
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZCK0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_13

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comp(7746..8969)
DNA (1224bp) protein (408aa)
RNA polymerase sigma factor {ECO:0000313|EMBL:KKU29561.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RNA polymerase sigma factor id=2823713 bin=GWC1_OD1_38_17 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RNA polymerase sigma factor RpoD
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_14
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

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comp(8966..10651)
DNA (1686bp) protein (562aa)
DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
DNA primase (EC:2.7.7.-)
DNA primase id=3736886 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_15
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

10671..11630
DNA (960bp) protein (320aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_16

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comp(11677..12324)
DNA (648bp) protein (216aa)
Transposase {ECO:0000313|EMBL:KKT29058.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
hypothetical protein; K07491 putative transposase id=5802977 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_17

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comp(12364..13593)
DNA (1230bp) protein (410aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29565.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
id=2169405 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16647_18

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comp(13590..13946)
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29566.1}; Flags: Fragment;; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Displaying 18 items

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