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RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_1
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

1..456
DNA (456bp) protein (152aa)
DNA polymerase III Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
DNA polymerase III, delta' subunit id=1903434 bin=GWD2_Nitrospirae-related_57_8 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_2
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

471..1022
DNA (552bp) protein (184aa)
frr; ribosome recycling factor Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
Frr; K02838 ribosome recycling factor id=5803375 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribosome recycling factor
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_3
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

1019..2110
DNA (1092bp) protein (364aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] id=5227116 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
membrane-associated zinc metalloprotease Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
membrane-associated zinc metalloprotease
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_4
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2436..2852
DNA (417bp) protein (139aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_5
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2928..5147
DNA (2220bp) protein (740aa)
chromosome segregation protein SMC Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
Smc; chromosome segregation ATPase; K03529 chromosome segregation protein id=5803429 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
chromosome segregation protein SMC
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_6
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(5454..5948)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI0003475D41
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_7
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6067..6735
DNA (669bp) protein (223aa)
Zn-dependent hydrolase Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
id=5803530 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Zn-dependent hydrolase
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_8
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6840..7238
DNA (399bp) protein (133aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_9
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

7420..7920
DNA (501bp) protein (167aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_10
GWA2_OD1_47_12, Parcubacteria, Bacteria

Not on your lists


8024..10504
DNA (2481bp) protein (827aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] id=5803528 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A Tax=GWA2_OD1_47_12
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_11
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

10587..11339
DNA (753bp) protein (251aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
Putative uncharacterized protein id=4952349 bin=GWC2_Deltaproteobacteria_42_51 species=Brachyspira hampsonii genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_12
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

11317..12300
DNA (984bp) protein (328aa)
Csp231I DNA methyltransferase Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
Putative uncharacterized protein id=4952350 bin=GWC2_Deltaproteobacteria_42_51 species=Ostreococcus lucimarinus virus OlV1 genus=Prasinovirus taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Csp231I DNA methyltransferase
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_13
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

12311..12838
DNA (528bp) protein (176aa)
methylase involved in ubiquinone/menaquinone biosynthesis Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
type 11 methyltransferase id=5803526 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
methylase involved in ubiquinone/menaquinone biosynthesis
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_14
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

12950..14212
DNA (1263bp) protein (421aa)
transmembrane_regions Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
transmembrane_regions id=5803525 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_15
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

14215..14655
DNA (441bp) protein (147aa)
transmembrane_regions 7..26 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
transmembrane_regions 7..26 id=8576 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_16
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

14732..15082
DNA (351bp) protein (117aa)
transmembrane_regions Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
transmembrane_regions id=5803523 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_17
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

15086..15406
DNA (321bp) protein (107aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_18
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

15411..15827
DNA (417bp) protein (139aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_19
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

16376..16732
DNA (357bp) protein (119aa)
hypothetical protein cdivTM_30108 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
hypothetical protein cdivTM_30108 id=1921027 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_20
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

16739..16984
DNA (246bp) protein (82aa)
transmembrane_regions Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
transmembrane_regions id=5227144 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_21
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(17171..17806)
DNA (636bp) protein (212aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_22
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(17921..19114)
DNA (1194bp) protein (398aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_23
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(19263..19439)
DNA (177bp) protein (59aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_24
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

19571..19849
DNA (279bp) protein (93aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_25
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

19958..20503
DNA (546bp) protein (182aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RNA polymerase, sigma-24 subunit, ECF subfamily protein id=3736405 bin=GWC2_OD1_43_27 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
ECF subfamily RNA polymerase sigma-24 factor
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_26
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

20632..20970
DNA (339bp) protein (113aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_27
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(21084..22754)
DNA (1671bp) protein (557aa)
DNA polymerase X family (EC:2.7.7.7) Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
DNA polymerase X family (EC:2.7.7.7)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000376CF9B
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_28
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

22851..23336
DNA (486bp) protein (162aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_29
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


23419..23682
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003649896
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
50S ribosomal protein L31
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_2791_30
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

23792..24760
DNA (969bp) protein (323aa)
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
id=5227040 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Peptide chain release factor 1
Displaying items 1-30 of 105 in total

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