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RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_1
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3..182
DNA (180bp) protein (60aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_2
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

233..1339
DNA (1107bp) protein (369aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_3
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1437..1820)
DNA (384bp) protein (128aa)
id=5803249 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
id=5803249 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_4
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1833..2321)
DNA (489bp) protein (163aa)
zinc finger/helix-turn-helix protein, YgiT family Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
hypothetical protein LfarK3_11829 id=3736747 bin=GWC2_OD1_43_27 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
zinc finger/helix-turn-helix protein, YgiT family
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_5
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(2427..2990)
DNA (564bp) protein (188aa)
Fatty acid hydroxylase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ72_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_6
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3093..3506
DNA (414bp) protein (138aa)
alias=gwe2_scaffold_279_110 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
alias=gwe2_scaffold_279_110 id=15189874 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_7
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3511..3858
DNA (348bp) protein (116aa)
hypothetical protein
id=5103514 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
id=5103514 bin=GW2011_AR20_complete species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_8
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(3855..4592)
DNA (738bp) protein (246aa)
SCI39.01c, SCI8.39; permease Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
Putative permease id=3238848 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
permease
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_9
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4617..6782
DNA (2166bp) protein (722aa)
recG; ATP-dependent DNA helicase; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] id=5803096 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_10
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(6881..7876)
DNA (996bp) protein (332aa)
rfaG1a; glycosyltransferase (EC:2.4.-.-) Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
rfaG1a; glycosyltransferase (EC:2.4.-.-)
Glycosyltransferase id=2110508 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_11
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(7863..8894)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000365C056
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_12
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

8913..9134
DNA (222bp) protein (74aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_13
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9131..10216)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000365C056
putative Glycosyl transferase, group 1 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
putative Glycosyl transferase, group 1
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_14
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10213..11577)
DNA (1365bp) protein (455aa)
Lamin A/C globular tail domain Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
Lamin A/C globular tail domain id=5803059 bin=OD1_GWC2_34_28 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_15
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(11581..13260)
DNA (1680bp) protein (560aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI000370105A
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_16
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(13619..14776)
DNA (1158bp) protein (386aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
hypothetical protein id=5227010 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_17
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(14780..14962)
DNA (183bp) protein (61aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_18
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

15009..15416
DNA (408bp) protein (136aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_19
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(15462..16139)
DNA (678bp) protein (226aa)
hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] id=5803064 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_20
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(16144..17397)
DNA (1254bp) protein (418aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8) Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] id=5226991 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_21
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(17394..18743)
DNA (1350bp) protein (450aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9) Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
id=5226982 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_40413_22
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(18828..19580)
DNA (753bp) protein (251aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
Displaying 22 items

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