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RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566

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Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_1
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3..560
DNA (558bp) protein (186aa)
parallel beta-helix repeat-containing protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
parallel beta-helix repeat-containing protein id=5803309 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_2
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


693..1190
DNA (498bp) protein (166aa)
50S ribosomal protein L10 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWP8_9BACT
LSU ribosomal protein L10P Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
LSU ribosomal protein L10P
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_3
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


1196..1603
DNA (408bp) protein (136aa)
50S ribosomal protein L7/L12 n=3 Tax=Clostridiales RepID=D5HE43_9FIRM id=53050 bin=ACD41 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
rplL; 50S ribosomal protein L7/L12
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_4
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

1736..2368
DNA (633bp) protein (211aa)
seg Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
seg id=5803313 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_5
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(2750..3574)
DNA (825bp) protein (275aa)
Integrase core domain protein n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M834_NEISI
integrase catalytic subunit Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
integrase core domain protein
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_6
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4203..4889
DNA (687bp) protein (229aa)
TM helix repeat-containing protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
small-conductance mechanosensitive ion channel id=5803314 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cmpX; TM helix repeat-containing protein
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_7
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(4972..5211)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI00035CE58C
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
rpmB; 50S ribosomal protein L28
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_8
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5254..5862
DNA (609bp) protein (203aa)
peptidase M50 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
peptidase M50 id=5803003 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M50
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_9
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


5912..6325
DNA (414bp) protein (138aa)
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5803002 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsL; 30S ribosomal protein S12
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_10
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


6332..6802
DNA (471bp) protein (157aa)
rpsG; 30S ribosomal protein S7 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
30S ribosomal protein S7 id=5227520 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rpsG; 30S ribosomal protein S7
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_11
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6837..7013
DNA (177bp) protein (59aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_12
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6986..7294
DNA (309bp) protein (103aa)
Uncharacterized conserved protein n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D043_PELTS
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_13
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

7301..7525
DNA (225bp) protein (75aa)
ycfa family protein; K07339 hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
ycfa family protein; K07339 hypothetical protein id=5084722 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_14
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

7585..9732
DNA (2148bp) protein (716aa)
translation elongation factor 2 (ef-2/ef-g); K02355 elongation factor G Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
id=5227521 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
translation elongation factor 2 (ef-2/ef-g)
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_15
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

9859..11055
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0R6_9BACT
tufA; elongation factor Tu; K02358 elongation factor Tu Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
translation elongation factor Tu
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_16
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


11161..11556
DNA (396bp) protein (132aa)
30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=5802994 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S10P
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_17
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


11729..12313
DNA (585bp) protein (195aa)
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
rplC; Ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5802993 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplC; 50S ribosomal protein L3
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_18
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


12350..13009
DNA (660bp) protein (220aa)
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=5802992 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplD; 50S ribosomal protein L4
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_19
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


13011..13406
DNA (396bp) protein (132aa)
LSU ribosomal protein L23P Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=5227351 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
LSU ribosomal protein L23P
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_20
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


13409..14266
DNA (858bp) protein (286aa)
50S ribosomal protein L2, plastid n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0R1_9BACT
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
rplB; 50S ribosomal protein L2
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_21
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(14444..14626)
DNA (183bp) protein (61aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_22
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


14717..15058
DNA (342bp) protein (114aa)
30S ribosomal protein S19 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZF6_9BACT
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
30S ribosomal protein S19
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_23
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


15060..15395
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=2 Tax=Mesoplasma florum RepID=RL22_MESFL
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
rplV; 50S ribosomal protein L22
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_24
GWA2_OD1_47_12, Parcubacteria, Bacteria

Not on your lists


15400..16065
DNA (666bp) protein (222aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GWE2_9ZZZZ
30S ribosomal protein S3 Tax=GWA2_OD1_47_12
ribosomal protein S3
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_25
GWA2_OD1_47_12, Parcubacteria, Bacteria

Not on your lists


16075..16491
DNA (417bp) protein (139aa)
50S ribosomal protein L16 Tax=GWA2_OD1_47_12
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=5227346 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
50S ribosomal protein L16
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_26
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


16530..16790
DNA (261bp) protein (87aa)
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 id=5803320 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsQ; 30S ribosomal protein S17
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_27
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


16796..17167
DNA (372bp) protein (124aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5803321 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L14
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_28
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


17177..17401
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA015-M09 RepID=UPI000033A131
50S ribosomal protein L24 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
50S ribosomal protein L24
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_29
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


17407..17958
DNA (552bp) protein (184aa)
50S ribosomal protein L5 n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI0003608887
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
rplE; 50S ribosomal protein L5
RIFCSPLOWO2_01_FULL_OD1_48_100_rifcsplowo2_01_scaffold_11566_30
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


18231..18617
DNA (387bp) protein (129aa)
30S ribosomal protein S8 n=1 Tax=Candidatus Actinomarina minuta RepID=S5DMD3_9ACTN
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
rpsH; 30S ribosomal protein S8
Displaying items 1-30 of 62 in total

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