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RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_33442

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_33442_1
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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326..1567
DNA (1242bp) protein (414aa)
putative DEAD/DEAH box helicase domain protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
DEAD/DEAH box helicase domain protein id=3012795 bin=GWC1_OD1_38_17 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
ATP-dependent RNA helicase RhlE
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_33442_2
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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1626..1847
DNA (222bp) protein (74aa)
id=18247983 Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
id=18247983 bin=AR5_curated_draft tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_33442_3
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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1872..2279
DNA (408bp) protein (136aa)
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
hypothetical protein id=129979 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_33442_4
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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comp(2313..5537)
DNA (3225bp) protein (1075aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
DNA polymerase III subunit alpha (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXJ6_9BACT
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_33442_5
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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5766..6434
DNA (669bp) protein (223aa)
ribonuclease h (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
rnhB; ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] id=5803442 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribonuclease h (EC:3.1.26.4)
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_33442_6
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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6680..6913
DNA (234bp) protein (78aa)
50S ribosomal protein L32 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVL6_9BACT
50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
50S ribosomal protein L32
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_33442_7
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6985..7893
DNA (909bp) protein (303aa)
putative transcription termination factor Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
NusB antitermination factor; K03625 N utilization substance protein B id=5803445 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
putative transcription termination factor
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_33442_8
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

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8042..8737
DNA (696bp) protein (232aa)
Ribonuclease 3 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZL1_9BACT
Ribonuclease 3 {ECO:0000313|EMBL:KKW21334.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
Ribonuclease 3
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_33442_9
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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comp(8675..8872)
DNA (198bp) protein (66aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_33442_10
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

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9135..10982
DNA (1848bp) protein (616aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000362C202
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:KKW21333.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
GTP-binding protein TypA/BipA
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_33442_11
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

Not on your lists

comp(11200..11694)
DNA (495bp) protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW19716.1}; Flags: Fragment;; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_33442_12
unknown

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comp(12087..12554)
DNA (468bp) protein (156aa)

This feature has no annotations

RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_33442_13
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12541..13248)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2GG30_9BACT
hypothetical protein
Tax=BJP_IG2158_Thermincola_46_17
Displaying 13 items

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