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RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_1
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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comp(1..102)
DNA (102bp) protein (34aa)
recombinase Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
resolvase domain-containing protein id=120799 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_2
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

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880..2394
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI0003699FC0
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000313|EMBL:KKW19905.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_3
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2458..2739
DNA (282bp) protein (94aa)
Marine sediment metagenome DNA, contig: S01H4_S18847 Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_4
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2820..3389
DNA (570bp) protein (190aa)
PDF1A; peptide deformylase 1A; K01462 peptide deformylase [EC:3.5.1.88] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] id=5227160 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
peptide deformylase (EC:3.5.1.88)
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_5
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3439..4311
DNA (873bp) protein (291aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] id=5803612 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
methionyl-tRNA formyltransferase
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_6
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(4360..5289)
DNA (930bp) protein (310aa)
RNA polymerase sigma factor SigA n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z8X5_9BACT
sigma-70 family RNA polymerase sigma factor Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
sigma-70 family RNA polymerase sigma factor
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_7
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(5777..6475)
DNA (699bp) protein (233aa)
peptidyl-prolyl isomerase (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase id=2073024 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_8
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

Not on your lists

comp(6541..6984)
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW19388.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
Sigma 54 modulation protein/ribosomal protein S30EA id=2598220 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_9
unknown

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comp(7016..8152)
DNA (1137bp) protein (379aa)
UPI0003D07A9A related cluster n=1 Tax=unknown RepID=UPI0003D07A9A
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_10

Not on your lists

comp(8167..8457)
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU77553.1}; TaxID=1618845 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_64.;"
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_11
unknown

Not on your lists

comp(8585..8737)
DNA (153bp) protein (51aa)

This feature has no annotations

RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_12
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

8935..9027
DNA (93bp) protein (31aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_13
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

9091..9258
DNA (168bp) protein (56aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_14
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9183..9884)
DNA (702bp) protein (234aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_15
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9927..10568)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036980AE
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_16
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

Not on your lists


10615..11745
DNA (1131bp) protein (377aa)
RNA binding S1 domain protein {ECO:0000313|EMBL:KKW19385.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 id=5803531 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S1
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_17
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(12234..12836)
DNA (603bp) protein (201aa)
Aminoacyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
Aminoacyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] id=5803533 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
aminoacyl-tRNA hydrolase (EC:3.1.1.29)
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_18
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

13022..13633
DNA (612bp) protein (204aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=5803493 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
signal peptidase I (EC:3.4.21.89)
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_60547_19
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

14071..15408
DNA (1338bp) protein (446aa)
hisS1; histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidyl-tRNA synthetase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYX5_9BACT
Displaying 19 items

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