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RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_13911

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_13911_1
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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2..748
DNA (747bp) protein (249aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
Short-chain dehydrogenase/reductase SDR id=2669948 bin=GWA1_ZB2_49_26 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
short-chain dehydrogenase/reductase SDR
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_13911_2
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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comp(899..1252)
DNA (354bp) protein (118aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_13911_3
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

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1274..2905
DNA (1632bp) protein (544aa)
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:KKW22606.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
Putative uncharacterized protein id=1898958 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
LPXTG-motif cell wall anchor domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_13911_4
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

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3001..3522
DNA (522bp) protein (174aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW22607.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_13911_5
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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3633..4190
DNA (558bp) protein (186aa)
hypothetical protein
transmembrane_regions Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
transmembrane_regions id=5227497 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_13911_6
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

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4285..8040
DNA (3756bp) protein (1252aa)
ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:KKW22609.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
Ribonucleoside-triphosphate reductase id=4968545 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_13911_7
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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8139..8708
DNA (570bp) protein (190aa)
ATP-cobalamin adenosyltransferase; K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZ73_9BACT
ATP-cobalamin adenosyltransferase
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_13911_8
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

8920..9273
DNA (354bp) protein (118aa)
Transcriptional regulator, ArsR family n=1 Tax=uncultured bacterium RepID=K2ERT5_9BACT
ArsR family transcriptional regulator Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
ArsR family transcriptional regulator
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_13911_9
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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9527..10033
DNA (507bp) protein (169aa)
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RNA polymerase sigma factor, sigma-70 family id=15190917 bin=GWC1_OP11_49_16_COMPLETE species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
ECF subfamily RNA polymerase sigma factor
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_13911_10
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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10020..11261
DNA (1242bp) protein (414aa)
seg 117..130 Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
seg 117..130 id=32378 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_13911_11
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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11506..12120
DNA (615bp) protein (205aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_13911_12
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

12552..12929
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037ADF7A
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_13911_13
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

12948..13025
DNA (78bp) protein (26aa)
disulfide formation protein C; K03611 disulfide bond formation protein DsbB Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
Displaying 13 items

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