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RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_1
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(51..407)
DNA (357bp) protein (119aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_2
RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

690..1292
DNA (603bp) protein (201aa)
Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_3
GWA1_OD1_44_24_partial, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

1297..1632
DNA (336bp) protein (112aa)
DNA topoisomerase Tax=GWA1_OD1_44_24_partial
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_4
unknown

Not on your lists

comp(1539..1793)
DNA (255bp) protein (85aa)

This feature has no annotations

RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_5
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1996..2334)
DNA (339bp) protein (113aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_6
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2711..3136
DNA (426bp) protein (142aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_7
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3129..4943
DNA (1815bp) protein (605aa)
Domain of unknown function DUF11 Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
Domain of unknown function DUF11 id=5801908 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_8
unknown

Not on your lists

comp(4954..5103)
DNA (150bp) protein (50aa)

This feature has no annotations

RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_9
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(5205..5840)
DNA (636bp) protein (212aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_10
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(6274..7995)
DNA (1722bp) protein (574aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] id=5803435 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidoglycan glycosyltransferase (EC:2.4.1.129)
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_11
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(7985..8314)
DNA (330bp) protein (110aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_12
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(8311..9258)
DNA (948bp) protein (316aa)
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-); K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] id=5803433 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Ribosomal RNA small subunit methyltransferase H Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
Ribosomal RNA small subunit methyltransferase H
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_13
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9347..9781)
DNA (435bp) protein (145aa)
MraZ protein; K03925 MraZ protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
Protein MraZ id=5226998 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
mraZ protein
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_14
GWC2_OD1_48_17, Parcubacteria, Bacteria

Not on your lists

comp(9792..9929)
DNA (138bp) protein (46aa)
Tax=GWC2_OD1_48_17
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_15
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

10064..10306
DNA (243bp) protein (81aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_16
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10186..10761)
DNA (576bp) protein (192aa)
Exopolysaccharide production protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EDX1_9RHOB
UDP-phosphate glucose phosphotransferase Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
UDP-phosphate glucose phosphotransferase
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_17
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10971..12443)
DNA (1473bp) protein (491aa)
lysS; Lysine--tRNA ligase (EC:6.1.1.6) Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
lysyl-tRNA synthetase (EC:6.1.1.6)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037C5D03
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_18
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(12481..12948)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI000380D2AE
transcription elongation factor GreA Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
greA; transcription elongation factor GreA
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_19
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

Not on your lists

comp(13103..14809)
DNA (1707bp) protein (569aa)
Penicillin-binding protein {ECO:0000313|EMBL:KKW20212.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
penicillin-binding protein 2; K05515 penicillin-binding protein 2 id=5803382 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
penicillin-binding protein
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_20
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(14860..15153)
DNA (294bp) protein (98aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_21
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(15157..16014)
DNA (858bp) protein (286aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_01_FULL_OD1_50_130_rifcsplowo2_01_scaffold_12239_22
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(15992..17173)
DNA (1182bp) protein (394aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins id=5803379 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rod shape-determining protein MreB
Displaying 22 items

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