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ACD11_14

Alias: ACD11_1957.35561.30

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD11_14_1

Not on your lists

274..1410
DNA (1137bp) protein (379aa)
phosphoesterase RecJ domain-containing protein
DHH phosphoesterases (db=superfamily db_id=SSF64182 from=16 to=332 evalue=3.6e-32)
TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A) POLYMERASE FAMILY MEMBER (db=HMMPanther db_id=PTHR13734 from=156 to=329 evalue=1.6e-17)
POLYA POLYMERASE (db=HMMPanther db_id=PTHR13734:SF4 from=156 to=329 evalue=1.6e-17)
ACD11_14_2

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1534..2151
DNA (618bp) protein (206aa)
coiled-coil (db=Coil db_id=coil from=26 to=54 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=23)
seg (db=Seg db_id=seg from=35 to=55)
Uncharacterized protein {ECO:0000313|EMBL:EKE16008.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD11_14_3

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2252..3514
DNA (1263bp) protein (421aa)
CHAP domain-containing protein
Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7ZQ22_NECH7 (db=UNIREF evalue=1.0e-15 bit_score=87.8 identity=38.58 coverage=27.5534441805226)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
seg (db=Seg db_id=seg from=228 to=254)
ACD11_14_4

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3601..3900
DNA (300bp) protein (100aa)
3601..3900 + (rbs_motif=TAAA rbs_spacer=6bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE16010.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD11_14_5

Not on your lists

4092..7112
DNA (3021bp) protein (1007aa)
hypothetical protein
seg (db=Seg db_id=seg from=457 to=472)
seg (db=Seg db_id=seg from=309 to=320)
coiled-coil (db=Coil db_id=coil from=24 to=45 evalue=NA)
ACD11_14_6

Not on your lists

7529..8539
DNA (1011bp) protein (337aa)
Holliday junction DNA helicase RuvB n=1 Tax=Thermincola sp. JR RepID=D5XEH5_9FIRM (db=UNIREF evalue=4.0e-120 bit_score=434.0 identity=63.2 coverage=99.1097922848665)
Holliday junction DNA helicase subunit RuvB
Holliday junction DNA helicase subunit RuvB
ruvB: Holliday junction DNA helicase RuvB (db=HMMTigr db_id=TIGR00635 from=21 to=325 evalue=1.9e-207 interpro_id=IPR004605 interpro_description=DNA helicase, Holliday junction RuvB type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Molecular Function: four-way junction helicase activity (GO:0009378))
ACD11_14_7

Not on your lists

8555..8773
DNA (219bp) protein (73aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=38 to=60)
Uncharacterized protein {ECO:0000313|EMBL:EKE16003.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD11_14_8

Not on your lists

8786..9373
DNA (588bp) protein (196aa)
hypothetical protein
seg (db=Seg db_id=seg from=36 to=47)
transmembrane_regions (db=TMHMM db_id=tmhmm from=64 to=86)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
ACD11_14_9

Not on your lists

9533..11224
DNA (1692bp) protein (564aa)
Extracellular nuclease n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XPA4_9CORY (db=UNIREF evalue=3.0e-08 bit_score=63.9 identity=32.59 coverage=23.0496453900709)
hypothetical protein; K07004 (db=KEGG evalue=4.0e-08 bit_score=63.5 identity=33.58 coverage=23.4042553191489)
seg (db=Seg db_id=seg from=459 to=475)
seg (db=Seg db_id=seg from=430 to=438)
ACD11_14_10

Not on your lists

comp(11257..12237)
DNA (981bp) protein (327aa)
seg (db=Seg db_id=seg from=113 to=124)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=11 to=63 evalue=1.4e-10)
TrmB (db=HMMPfam db_id=PF01978 from=16 to=64 evalue=1.9e-07 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
Uncharacterized protein {ECO:0000313|EMBL:EKE16006.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD11_14_11

Not on your lists

12578..13294
DNA (717bp) protein (239aa)
hypothetical protein
seg (db=Seg db_id=seg from=219 to=230)
DUF28 (db=HMMPfam db_id=PF01709 from=5 to=238 evalue=1.7e-83 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
YebC-like (db=superfamily db_id=SSF75625 from=5 to=238 evalue=5.9e-83 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
ACD11_14_12

Not on your lists

13298..13822
DNA (525bp) protein (175aa)
crossover junction endodeoxyribonuclease RuvC
RUVC (db=PatternScan db_id=PS01321 from=123 to=158 evalue=0.0 interpro_id=IPR020563 interpro_description=Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site)
RuvC (db=HMMPfam db_id=PF02075 from=13 to=161 evalue=4.8e-50 interpro_id=IPR002176 interpro_description=Crossover junction endodeoxyribonuclease RuvC GO=Molecular Function: endodeoxyribonuclease activity (GO:0004520), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=11 to=170 evalue=9.6e-50)
ACD11_14_13

Not on your lists

13833..14492
DNA (660bp) protein (220aa)
hypothetical protein
seg (db=Seg db_id=seg from=152 to=163)
seg (db=Seg db_id=seg from=101 to=113)
seg (db=Seg db_id=seg from=80 to=94)
ACD11_14_14

Not on your lists

14531..15940
DNA (1410bp) protein (470aa)
alpha-L-glutamate ligase-like protein
Alpha-L-glutamate ligase-like protein n=1 Tax=bacterium S5 RepID=D3C0C9_9BACT (db=UNIREF evalue=5.0e-54 bit_score=215.0 identity=43.93 coverage=63.8297872340426)
seg (db=Seg db_id=seg from=138 to=150)
seg (db=Seg db_id=seg from=192 to=212)
ACD11_14_15

Not on your lists

16000..16956
DNA (957bp) protein (319aa)
putative ribosomal protein S6 modification protein; K05844 ribosomal protein S6 modification protein (db=KEGG evalue=6.0e-10 bit_score=68.6 identity=22.44 coverage=86.2068965517241)
coiled-coil (db=Coil db_id=coil from=133 to=154 evalue=NA)
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=118 to=318 evalue=1.1e-23)
RimK (db=HMMPfam db_id=PF08443 from=131 to=298 evalue=5.6e-13 interpro_id=IPR013651 interpro_description=ATP-grasp fold, RimK-type)
ACD11_14_16

Not on your lists

16969..18018
DNA (1050bp) protein (350aa)
hypothetical protein
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=7 to=346 evalue=1.4e-52)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF7 from=10 to=345 evalue=7.6e-45)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=10 to=345 evalue=7.6e-45)
ACD11_14_17

Not on your lists

18058..18495
DNA (438bp) protein (146aa)
seg (db=Seg db_id=seg from=67 to=76)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=5 to=144 evalue=3.6e-16 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acetyltransf_1 (db=HMMPfam db_id=PF00583 from=52 to=123 evalue=7.0e-10 interpro_id=IPR022610 interpro_description=GCN5-related N-acetyltransferase, C-terminal)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=18 to=145 evalue=1.4e-08 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
ACD11_14_18

Not on your lists

18510..19844
DNA (1335bp) protein (445aa)
seg (db=Seg db_id=seg from=138 to=150)
seg (db=Seg db_id=seg from=79 to=94)
coiled-coil (db=Coil db_id=coil from=72 to=93 evalue=NA)
DUF1704 (db=HMMPfam db_id=PF08014 from=50 to=433 evalue=6.1e-26 interpro_id=IPR012548 interpro_description=Protein of unknown function DUF1704)
ACD11_14_19

Not on your lists

19948..22437
DNA (2490bp) protein (830aa)
hypothetical protein
hypothetical protein
Penicillin-binding protein, 1A family n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UUN3_ROSS1 (db=UNIREF evalue=6.0e-132 bit_score=475.0 identity=40.0 coverage=81.3253012048193)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
ACD11_14_20

Not on your lists

22446..23018
DNA (573bp) protein (191aa)
Holliday junction DNA helicase RuvA
seg (db=Seg db_id=seg from=62 to=74)
ruvA: Holliday junction DNA helicase RuvA (db=HMMTigr db_id=TIGR00084 from=1 to=189 evalue=2.5e-44 interpro_id=IPR000085 interpro_description=Bacterial DNA recombination protein RuvA GO=Molecular Function: DNA helicase activity (GO:0003678), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=62 evalue=2.1e-20 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
ACD11_14_21

Not on your lists

23041..24105
DNA (1065bp) protein (355aa)
methicillin resistance protein
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=151 to=318 evalue=4.1e-43 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=159 to=346 evalue=8.0e-39 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
FemAB (db=HMMPfam db_id=PF02388 from=6 to=241 evalue=3.6e-29 interpro_id=IPR003447 interpro_description=Methicillin resistance protein GO=Biological Process: peptidoglycan biosynthetic process (GO:0009252))
ACD11_14_22

Not on your lists

24171..24797
DNA (627bp) protein (209aa)
Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EKJ7_9FIRM (db=UNIREF evalue=2.0e-17 bit_score=92.0 identity=36.54 coverage=70.3349282296651)
guanosine polyphosphate pyrophosphohydrolase/synthetase
coiled-coil (db=Coil db_id=coil from=125 to=146 evalue=NA)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=26 to=176 evalue=4.0e-22)
ACD11_14_23

Not on your lists

24891..26144
DNA (1254bp) protein (418aa)
UDP-N-acetylmuramyl-tripeptide synthetase (EC:6.3.2.13)
seg (db=Seg db_id=seg from=38 to=49)
murE: UDP-N-acetylmuramyl-tripeptide synthet (db=HMMTigr db_id=TIGR01085 from=1 to=414 evalue=1.8e-123 interpro_id=IPR005761 interpro_description=UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: regulation of cell shape (GO:0008360), Biological Process: peptidoglycan biosynthetic process (GO:0009252), Biological Process: peptidoglycan-based cell wall biogenesis (GO:0009273), Mole
MUR LIGASE FAMILY MEMBER (db=HMMPanther db_id=PTHR23135 from=40 to=416 evalue=5.4e-117)
ACD11_14_24

Not on your lists

26157..26546
DNA (390bp) protein (130aa)
seg (db=Seg db_id=seg from=63 to=76)
Uncharacterized protein {ECO:0000313|EMBL:EKE15989.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD11_14_25

Not on your lists

comp(26641..27078)
DNA (438bp) protein (146aa)
hypothetical protein
Divergent PAP2 family protein n=1 Tax=Turicibacter sp. PC909 RepID=D4W446_9FIRM (db=UNIREF evalue=9.0e-16 bit_score=85.9 identity=36.76 coverage=85.6164383561644)
seg (db=Seg db_id=seg from=8 to=19)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
ACD11_14_26

Not on your lists

27241..27795
DNA (555bp) protein (185aa)
membrane protein
LemA-like protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B255F (db=UNIREF evalue=1.0e-57 bit_score=225.0 identity=67.07 coverage=88.1081081081081)
seg (db=Seg db_id=seg from=168 to=183)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
ACD11_14_27

Not on your lists

27862..28578
DNA (717bp) protein (239aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
Uncharacterized protein {ECO:0000313|EMBL:EKE15992.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD11_14_28

Not on your lists

28585..29478
DNA (894bp) protein (298aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=38 to=60)
transmembrane_regions (db=TMHMM db_id=tmhmm from=153 to=175)
ACD11_14_29

Not on your lists

29503..30198
DNA (696bp) protein (232aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
seg (db=Seg db_id=seg from=35 to=51)
Uncharacterized protein {ECO:0000313|EMBL:EKE15994.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD11_14_30

Not on your lists

30239..30733
DNA (495bp) protein (165aa)
seg (db=Seg db_id=seg from=118 to=129)
seg (db=Seg db_id=seg from=84 to=100)
Uncharacterized protein {ECO:0000313|EMBL:EKE15995.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 1-30 of 35 in total

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