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RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_1
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

126..1559
DNA (1434bp) protein (478aa)
peptidase M23 family protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Peptidase M23 family protein id=1981121 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
peptidase M23 family protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_2
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

1623..1889
DNA (267bp) protein (89aa)
id=1981117 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=1981117 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_3
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2065..2226)
DNA (162bp) protein (54aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_4
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


2433..2939
DNA (507bp) protein (169aa)
rpsF; ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
30S ribosomal protein S6 id=1816778 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
rpsF; ribosomal protein S6
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_5
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

2995..3483
DNA (489bp) protein (163aa)
single stranded DNA-binding protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Single-stranded DNA-binding protein id=1816776 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_6
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


3556..3789
DNA (234bp) protein (78aa)
rpsR; 30S ribosomal protein S18 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
30S ribosomal protein S18 id=1816773 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
rpsR; 30S ribosomal protein S18
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_7
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

3795..4352
DNA (558bp) protein (186aa)
translation elongation factor P (EF-P); K02356 elongation factor P Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Elongation factor P id=1816730 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
translation elongation factor P (EF-P)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_8
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(4688..5731)
DNA (1044bp) protein (348aa)
recA; multifunctional SOS repair factor Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Protein RecA id=1816728 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
recA; multifunctional SOS repair factor
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_9
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5834..6502)
DNA (669bp) protein (223aa)
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Transcriptional regulator, XRE family id=1816726 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_10
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6581..6964)
DNA (384bp) protein (128aa)
hypothetical protein cdivTM_30108 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
hypothetical protein cdivTM_30108 id=1816724 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_11
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6967..8352)
DNA (1386bp) protein (462aa)
ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Extracellular solute-binding protein family 1 id=1816722 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
ABC transporter substrate-binding protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_12
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8507..10033)
DNA (1527bp) protein (509aa)
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Mg chelatase, subunit ChlI id=1816720 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Mg chelatase subunit ChlI
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_13
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

10392..10742
DNA (351bp) protein (117aa)
id=2169594 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=2169594 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_14
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10822..11142)
DNA (321bp) protein (107aa)
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
UPF0109 protein LDC_0451 id=1899157 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RNA-binding protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_15
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(11317..11724)
DNA (408bp) protein (136aa)
rpsP; 30S ribosomal protein S16 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
30S ribosomal protein S16 id=1899155 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
rpsP; 30S ribosomal protein S16
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_16
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

11931..12515
DNA (585bp) protein (195aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_17
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(12799..15489)
DNA (2691bp) protein (897aa)
valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
valyl-tRNA synthetase (EC:6.1.1.9)
Valyl-tRNA synthetase (Fragment) n=1 Tax=uncultured bacterium RepID=K2GFU2_9BACT
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_18
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

15782..16000
DNA (219bp) protein (73aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_19
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

16471..16968
DNA (498bp) protein (166aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_20
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


17036..19831
DNA (2796bp) protein (932aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A id=1899447 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_21
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(19931..20155)
DNA (225bp) protein (75aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_22
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(20349..21320)
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GWA7_9EURY
N-6 DNA methylase Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
N-6 DNA methylase
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_705_23
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(21310..23223)
DNA (1914bp) protein (638aa)
N-6 DNA methylase n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GWA6_9EURY
N-6 DNA methylase Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
N-6 DNA methylase
Displaying 23 items

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