ggKbase home page

RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_1
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

313..615
DNA (303bp) protein (101aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_2
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

1017..2159
DNA (1143bp) protein (381aa)
id=1899388 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=1899388 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_3
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

2216..3160
DNA (945bp) protein (315aa)
Putative uncharacterized protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Putative uncharacterized protein id=1899386 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_4
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

3308..4882
DNA (1575bp) protein (525aa)
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Uncharacterized protein id=1899343 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_5
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

4925..5746
DNA (822bp) protein (274aa)
id=1899342 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=1899342 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_6
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

5782..6159
DNA (378bp) protein (126aa)
id=1899341 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=1899341 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_7
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

6180..7028
DNA (849bp) protein (283aa)
Uncharacterized protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Uncharacterized protein id=1899340 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_8
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

7177..8967
DNA (1791bp) protein (597aa)
Putative uncharacterized protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Putative uncharacterized protein id=1899339 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_9
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

9078..9542
DNA (465bp) protein (155aa)
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Heat shock protein Hsp20 id=1899338 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_10
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

9582..11342
DNA (1761bp) protein (587aa)
hypothetical protein
id=1899337 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=1899337 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_11
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

11442..12059
DNA (618bp) protein (206aa)
LmbE family protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
LmbE family protein id=1899336 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
LmbE family protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_12
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

12087..12206
DNA (120bp) protein (40aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_13
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

12258..13403
DNA (1146bp) protein (382aa)
group 1 glycosyl transferase Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Glycosyl transferase group 1 id=1899335 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
group 1 glycosyl transferase
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_14
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

13627..13881
DNA (255bp) protein (85aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_15
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

13881..14123
DNA (243bp) protein (81aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_16
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

14116..14295
DNA (180bp) protein (60aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_17
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14381..15535)
DNA (1155bp) protein (385aa)
glycogen debranching protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Putative uncharacterized protein id=1827479 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
glycogen debranching protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_18
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(15606..16181)
DNA (576bp) protein (192aa)
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Putative uncharacterized protein id=1827483 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_19
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16197..18416)
DNA (2220bp) protein (740aa)
group 1 glycosyl transferase Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Glycosyl transferase group 1 id=1827485 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
group 1 glycosyl transferase
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_20
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(18413..19480)
DNA (1068bp) protein (356aa)
glycosidase-like protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
PH1107-like glycosidase id=1827488 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
glycosidase-like protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_21
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

19675..20349
DNA (675bp) protein (225aa)
two component transcriptional regulator, winged helix family; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=RIFOXYD2_FULL_OD1_Falkowbacteria
Response regulator receiver domain protein (CheY-like) id=1827491 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
winged-helix transcriptional response regulator
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_22
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

20566..21876
DNA (1311bp) protein (437aa)
guanidinoacetate N-methyltransferase-like Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Guanidinoacetate N-methyltransferase, putative id=1279287 bin=GWE1_Burkholderiales_65_30 species=Perkinsus marinus genus=Perkinsus taxon_order=Perkinsida taxon_class=unknown phylum=unknown tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
putative multi-domain non-ribosomal peptide synthetase
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_23
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

21876..22352
DNA (477bp) protein (159aa)
S-adenosylmethionine decarboxylase-like protein; K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Adenosylmethionine decarboxylase proenzyme n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LG66_SYNFM
S-adenosylmethionine decarboxylase-like protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_24
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

22400..23077
DNA (678bp) protein (226aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_25
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

23120..25279
DNA (2160bp) protein (720aa)
signal transduction histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
PAS/PAC Sensor Hybrid Histidine Kinase id=1797517 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
signal transduction histidine kinase
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_26
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

25447..26472
DNA (1026bp) protein (342aa)
signal transduction histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
signal transduction histidine kinase (EC:2.7.3.-)
Predicted signal transduction histidine kinase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8X6_UNCMA
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_27
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

26486..27379
DNA (894bp) protein (298aa)
PAS/PAC sensor protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2QAP2_METFO
PAS/PAC sensor protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
PAS/PAC sensor protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_28
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

27386..28435
DNA (1050bp) protein (350aa)
ABC transporter, periplasmic spermidine putrescine-binding protein PotD n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CC92_9CLOT
extracellular solute-binding protein; K11069 spermidine/putrescine transport system substrate-binding protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
extracellular solute-binding protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_29
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

28411..31272
DNA (2862bp) protein (954aa)
multi-sensor signal transduction histidine kinase Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
PAS id=1797514 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
multi-sensor signal transduction histidine kinase
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_245_30
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

31384..31797
DNA (414bp) protein (138aa)
response regulator receiver protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Response regulator receiver protein id=1797511 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
response regulator receiver protein
Displaying items 1-30 of 85 in total

View Taxonomy