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RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_1
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

168..773
DNA (606bp) protein (202aa)
GPR1/FUN34/yaaH family protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GKI2_METPE
GPR1/FUN34/yaaH family protein; K07034 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
GPR1/FUN34/yaaH family protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_2
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

789..1961
DNA (1173bp) protein (391aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=sediment metagenome RepID=D9PHG5_9ZZZZ
L-alanine:N-amidino-3-keto-scyllo-inosamine aminotransferase Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
L-alanine:N-amidino-3-keto-scyllo-inosamineaminotransferase
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_3
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2257..3213)
DNA (957bp) protein (319aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Methionyl-tRNA formyltransferase id=1987549 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
methionyl-tRNA formyltransferase
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_4
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

3320..3967
DNA (648bp) protein (216aa)
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
DedA family protein id=2084923 bin=GWB2_Bacteroidetes_32_14 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
putative membrane-associated protein (DedA family)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_5
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3975..4436)
DNA (462bp) protein (154aa)
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
peptide deformylase (EC:3.5.1.88)
Peptide deformylase id=2076420 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_6
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

4495..4797
DNA (303bp) protein (101aa)
id=2076418 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=2076418 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_7
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4882..5667)
DNA (786bp) protein (262aa)
extradiol ring-cleavage dioxygenase class III protein subunit B Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B id=2076416 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
extradiol ring-cleavage dioxygenase class III protein subunit B
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_8
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5781..7229)
DNA (1449bp) protein (483aa)
wcqK; conserved secreted protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Putative secreted protein id=2076415 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
wcqK; conserved secreted protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_9
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7345..9984)
DNA (2640bp) protein (880aa)
clpB; ATP-dependent Clp protease ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Chaperone protein clpB id=2076414 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
clpB; ATP-dependent Clp protease ATP-binding subunit
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_10
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10177..11190)
DNA (1014bp) protein (338aa)
radical SAM domain-containing protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Pyruvate-formate-lyase-activating enzyme id=2076413 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
radical SAM domain-containing protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_11
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

11329..12081
DNA (753bp) protein (251aa)
n-acetylglucosaminyldiphosphoundecaprenol n-acetyl-beta-d-mannosaminyltransferase (EC:2.4.1.187); K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_3
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase (EC:2.4.1.187)
Glycosyl transferase, WecB/TagA/CpsF family id=2076412 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_12
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

12078..12263
DNA (186bp) protein (62aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_13
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

12325..13794
DNA (1470bp) protein (490aa)
Glutamyl/glutaminyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Glutamate--tRNA ligase id=2076411 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
glutamyl/glutaminyl-tRNA synthetase
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_14
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

13899..15137
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037833F2
peptidase M23 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
peptidase M23
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_15
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(15306..16268)
DNA (963bp) protein (321aa)
putative Tyrosine recombinase xerD Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Tyrosine recombinase xerD id=2076409 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tyrosine recombinase XerD
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_16
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

16365..17426
DNA (1062bp) protein (354aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_17
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

17670..18914
DNA (1245bp) protein (415aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_18
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

18916..19947
DNA (1032bp) protein (344aa)
Radical SAM domain protein n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XKD4_9HELI
molybdenum cofactor biosynthesis protein A Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
molybdenum cofactor biosynthesis protein A
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_19
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

20411..21100
DNA (690bp) protein (230aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_20
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

21295..22359
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00035C2E07
putative glycosyltransferase Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
putative glycosyltransferase
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_21
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

22497..23291
DNA (795bp) protein (265aa)
Predicted glycosyltransferases Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Putative glycosyltransferase id=2076506 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Predicted glycosyltransferases
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_22
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

23472..24329
DNA (858bp) protein (286aa)
UDP-glucose pyrophosphorylase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00035CD672
hypothetical protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_23
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(24458..25813)
DNA (1356bp) protein (452aa)
id=2076253 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=2076253 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_24
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(25853..27118)
DNA (1266bp) protein (422aa)
UDP-N-acetylglucosamine1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
UDP-N-acetylglucosamine1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091) RepID=F2NWT6_TRES6
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_25
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

27320..28579
DNA (1260bp) protein (420aa)
ctpA; carboxy-terminal-processing protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
ctpA; carboxy-terminal-processing protease (EC:3.4.21.102)
Carboxyl-terminal protease id=2076256 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_26
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

28590..28970
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000368BFDC
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_27
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

28990..29196
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037FD8CD
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_28
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

29200..30675
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037190AB
His-Xaa-Ser system radical SAM maturase HxsB Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
His-Xaa-Ser system radical SAM maturase HxsB
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_29
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

30676..30990
DNA (315bp) protein (105aa)
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Putative uncharacterized protein id=4788549 bin=GWA2_Elusimicrobia_51_34 species=Bombyx mori genus=Bombyx taxon_order=Lepidoptera taxon_class=Insecta phylum=Arthropoda tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
hypothetical protein
RIFOXYC2_FULL_OD1_34_220_rifoxyc2_full_scaffold_449_30
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

31159..33819
DNA (2661bp) protein (887aa)
acetyl-CoA synthetase / acetyltransferase (GNAT) family protein (EC:6.2.1.13) Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
acetyl-CoA synthetase / acetyltransferase (GNAT) family protein (EC:6.2.1.13)
Acetyltransferase, GNAT family id=2169409 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Displaying 30 items

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