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RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_1
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

1..426
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000365DF08
DNA internalization-related competence protein ComEC/Rec2 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
ComEC/Rec2-like protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_2
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(465..914)
DNA (450bp) protein (150aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_3
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

1165..2469
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000366A8E5
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_4
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

2462..3484
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000380714F
hypothetical protein
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_5
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

3824..4126
DNA (303bp) protein (101aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_6
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

4289..4816
DNA (528bp) protein (176aa)
paaX; phenylacetic acid degradation operon negative regulatory protein PaaX
paaX; phenylacetic acid degradation operon negative regulatory protein; K02616 phenylacetic acid degradation operon negative regulatory protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
paaX; phenylacetic acid degradation operon negative regulatory protein; K02616 phenylacetic acid degradation operon negative regulatory protein id=43597 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_7
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

5091..5594
DNA (504bp) protein (168aa)
HD Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
HD id=136758 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_8
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

5677..6396
DNA (720bp) protein (240aa)
glycosyltransferase (EC:2.4.1.-) Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
glycosyltransferase (EC:2.4.1.-)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037A53A1
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_9
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

6413..7708
DNA (1296bp) protein (432aa)
2-alkenal reductase; K08070 2-alkenal reductase [EC:1.3.1.74] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003710990
serine protease
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_10
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

7893..8135
DNA (243bp) protein (81aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_11
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

8250..10973
DNA (2724bp) protein (908aa)
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
ATP-dependent chaperone ClpB id=2720171 bin=GWA1_ZB2_49_26 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
ATP-dependent chaperone ClpB
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_12
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(11040..11816)
DNA (777bp) protein (259aa)
RTX family of calcium-binding proteins n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LPS1_SYNAS
calcium-binding RTX family protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
calcium-binding RTX family protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_13
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

11877..12377
DNA (501bp) protein (167aa)
RNA polymerase sigma factor, sigma-70 family Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RNA polymerase sigma factor, sigma-70 family id=15190917 bin=GWC1_OP11_49_16_COMPLETE species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
RNA polymerase sigma factor, sigma-70 family
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_14
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

12367..13191
DNA (825bp) protein (275aa)
intracellular protein transport protein USO1 (EC:1.3.1.74 3.1.3.48) Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
intracellular protein transport protein USO1 (EC:1.3.1.74 3.1.3.48)
Uncharacterized protein id=5095399 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_15
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

13506..14045
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003615D0F
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway-like protein (paaX); K02616 phenylacetic acid degradation operon negative regulatory protein Tax=RIFOXYB1_FULL_RIF_OD1_0
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway-like protein (paaX)
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_16
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

14196..14765
DNA (570bp) protein (190aa)
nuclease (SNase-like) Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
nuclease (SNase-like) id=5044609 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
nuclease (SNase-like)
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_17
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

14762..16210
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWW9_9BACT
beta-lactamase domain lipoprotein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
beta-lactamase domain lipoprotein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_18
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

16220..17317
DNA (1098bp) protein (366aa)
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=uncultured bacterium RepID=K2EBY5_9BACT
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_19
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

17413..17925
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035D32F6
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_20
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

17964..18470
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000381F067
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RNA polymerase ECF-type sigma factor
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_21
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

18613..19278
DNA (666bp) protein (222aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_22
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

19447..21453
DNA (2007bp) protein (669aa)
Cell wall surface anchored protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Cell wall surface anchored protein id=4901181 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_23
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

21578..22279
DNA (702bp) protein (234aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Putative uncharacterized protein id=3634404 bin=GWA1_ZB2_49_26 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_24
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(22307..24619)
DNA (2313bp) protein (771aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EI05_9BACT
O-antigen polymerase Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
O-antigen polymerase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_25
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(24623..25393)
DNA (771bp) protein (257aa)
MTAP; S-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28) Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
MTAP; S-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036F706F
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_26
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

25686..26402
DNA (717bp) protein (239aa)
nucleoside-diphosphate-sugar pyrophosphorylase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003796361
nucleoside-diphosphate-sugar pyrophosphorylase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_27
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

26484..26738
DNA (255bp) protein (85aa)
DNA binding domain protein, excisionase family Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
DNA binding domain protein, excisionase family id=2720130 bin=GWA1_ZB2_49_26 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_28
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

26764..27576
DNA (813bp) protein (271aa)
UDP-glucose/GDP-mannose dehydrogenase family Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
UDP-glucose 6-dehydrogenase id=2619711 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
UDP-glucose/GDP-mannose dehydrogenase family
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_29
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

27581..28648
DNA (1068bp) protein (356aa)
gmd; GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
GDP-mannose 4,6-dehydratase n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035D629F
gmd; GDP-mannose 4,6-dehydratase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_74_30
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

28651..29598
DNA (948bp) protein (316aa)
NAD-dependent epimerase/dehydratase family protein; K02377 GDP-L-fucose synthase [EC:1.1.1.271] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
GDP-L-fucose synthase n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036C3E6B
NAD-dependent epimerase/dehydratase family protein
Displaying items 1-30 of 90 in total

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