ggKbase home page

RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_8

Organism: Candidatus Staskawiczbacteria bacterium RIFOXYD1_FULL_37_110

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(5633..6052)

Top 3 Functional Annotations

Value Algorithm Source
pilA; type IV pilin PilA; K02650 type IV pilus assembly protein PilA Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 279
  • Evalue 2.80e-72
Putative fimbrial protein id=1273277 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 123.0
  • Bit_score: 71
  • Evalue 1.10e-09
pilA; type IV pilin PilA similarity KEGG
DB: KEGG
  • Identity: 33.8
  • Coverage: 148.0
  • Bit_score: 69
  • Evalue 8.70e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB1_FULL_RIF_OD1_06_37_44_curated → RIF-OD1-6 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGAATAAACAAAAAGGTTTTACAATTATTGAATTAATCGTTGTTATTGCAATTATCGCAGTTTTGGCGGCCATTGTGTTGGTTAACGTAACGCAGTACATTGCAAAAGGAAGAGATTCAGCCATTAAGGGAGATATGAGCACTATAATGGCAAACTCCGCCGTGTATTTTGATGAGCAAACTCCAACCACGTATGTGGGCTATAAATTAGATAATAAATATTTAAATCCATCGGGCGCCGCTACTGATGCCGGTGGCACCGGATTAGACGCGGCTGAAAGCGCTTCAGCTTTCTGTGCCACAATAACCCTTAATGACGGAAGTTTTTGGTGTGTTGATAGTACCGGATATGCTGGAGTTCCTACTGCTGTTGACACCTGCGATAGTACTGCTGGATCTGAGAATTATACTTGTAAATAA
PROTEIN sequence
Length: 140
MNKQKGFTIIELIVVIAIIAVLAAIVLVNVTQYIAKGRDSAIKGDMSTIMANSAVYFDEQTPTTYVGYKLDNKYLNPSGAATDAGGTGLDAAESASAFCATITLNDGSFWCVDSTGYAGVPTAVDTCDSTAGSENYTCK*