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RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_1
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(2..715)
DNA (714bp) protein (238aa)
DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
ligA; DNA ligase id=15189900 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
ligA; DNA ligase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_2
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(718..2196)
DNA (1479bp) protein (493aa)
lipoprotein precursor Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Probable lipoprotein id=2061860 bin=GWD2_CPR2_39_7 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
lipoprotein precursor
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_3
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(2193..2849)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI000380D48C
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_4
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(2851..3447)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003747F1D
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_5
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(3457..4182)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000360F138
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_6
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(4179..5036)
DNA (858bp) protein (286aa)
type IV prepilin leader peptidase PilD; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036F7777
type IV prepilin leader peptidase PilD
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_7
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(5121..5621)
DNA (501bp) protein (167aa)
hypothetical protein, partial n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI00037EAE1F
hypothetical protein, partial Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_8
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(5633..6052)
DNA (420bp) protein (140aa)
pilA; type IV pilin PilA; K02650 type IV pilus assembly protein PilA Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Putative fimbrial protein id=1273277 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
pilA; type IV pilin PilA
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_9
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(6321..6764)
DNA (444bp) protein (148aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_10
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(6879..8087)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037DEC08
Tfp pilus biogenesis protein PilC; K02653 type IV pilus assembly protein PilC Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Tfp pilus biogenesis protein PilC
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_11
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(8203..9267)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003714CBB
pilT; twitching motility protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
twitching motility protein
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_12
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(9371..11089)
DNA (1719bp) protein (573aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037F273B
pilB1; type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
type II secretion system protein E
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_13
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(11091..11510)
DNA (420bp) protein (140aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_14
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(11525..12094)
DNA (570bp) protein (190aa)
Marine sediment metagenome DNA, contig: S06H3_C05369 Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_15
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(12091..12885)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI000377114E
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_16
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(12925..14040)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003760F77
pilM; type IV pilus biogenesis protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
pilM; type IV pilus biogenesis protein PilM
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_17
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

14201..14968
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000365C106
phosphoribosyltransferase Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
phosphoribosyltransferase
RIFOXYD1_FULL_CPR_37_110_rifoxyd1_full_scaffold_1266_18
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(14997..16454)
DNA (1458bp) protein (486aa)
lipoprotein precursor Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Putative uncharacterized protein id=3327725 bin=GWC1_CPR2_39_9 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
lipoprotein precursor
Displaying 18 items

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