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RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_1
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(91..714)
DNA (624bp) protein (208aa)
ribonuclease h (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
ribonuclease h (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002) RepID=E4SFN5_CALK2
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_2
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(718..1791)
DNA (1074bp) protein (358aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8 5.3.1.9); K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8 5.3.1.9)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YLS5_9BACT
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_3
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

1890..2210
DNA (321bp) protein (107aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_4
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

2225..3220
DNA (996bp) protein (332aa)
tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
trpS; tryptophan--tRNA ligase TrpS (EC:6.1.1.2)
Tryptophan--tRNA ligase id=1981108 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_5
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3655..3969)
DNA (315bp) protein (105aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_6
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4008..5159)
DNA (1152bp) protein (384aa)
exopolyphosphatase-like protein; K06881 phosphoesterase RecJ domain-containing protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
MgpA protein id=1816992 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
exopolyphosphatase-like protein
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_7
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

5468..7288
DNA (1821bp) protein (607aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH id=1899145 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_8
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7391..8263)
DNA (873bp) protein (291aa)
5,10-methylene-tetrahydrofolate dehydrogenase (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] Tax=RIFOXYD2_FULL_OD1_
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD id=1816885 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_9
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

8358..8681
DNA (324bp) protein (108aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_10
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8742..9989)
DNA (1248bp) protein (416aa)
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase id=1816879 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_11
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10528..10911)
DNA (384bp) protein (128aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_12
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10941..12011)
DNA (1071bp) protein (357aa)
hydrolase of the HAD superfamily Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Metal dependent phosphohydrolase id=1981210 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hydrolase of the HAD superfamily
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_13
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12349..12732)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F731_9BACT
Uncharacterized protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_14
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12898..13854)
DNA (957bp) protein (319aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B5L4_9DELT
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_15
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(13967..15595)
DNA (1629bp) protein (543aa)
histone acetyltransferase, ELP3 family (EC:2.3.1.48); K07739 elongator complex protein 3 [EC:2.3.1.48] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Histone acetyltransferase ELP3 family id=1816872 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
histone acetyltransferase, ELP3 family
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_16
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

15667..15852
DNA (186bp) protein (62aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_17
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

16253..16903
DNA (651bp) protein (217aa)
cation transporter n=1 Tax=Staphylococcus RepID=UPI0002D68506
cation transporter
cation transporter Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_18
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

16945..17196
DNA (252bp) protein (84aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_19
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

17209..17340
DNA (132bp) protein (44aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_20
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


17359..17556
DNA (198bp) protein (66aa)
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
50S ribosomal protein L32 id=3940352 bin=GWB1_Berkelbacteria_38_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
rpmF; 50S ribosomal protein L32
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_21
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

17652..18164
DNA (513bp) protein (171aa)
putative transcription termination factor Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
N utilization substance protein B homolog id=1816967 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
putative transcription termination factor
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_22
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

18278..18970
DNA (693bp) protein (231aa)
putative ribonuclease III (EC:3.1.26.3) Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Ribonuclease 3 id=1816969 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Ribonuclease 3
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_23
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

19361..20053
DNA (693bp) protein (231aa)
seg 5..25 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
seg 5..25 id=130497 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_600_24
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

20177..20992
DNA (816bp) protein (272aa)
Membrane metalloendopeptidase (Fragment) n=1 Tax=uncultured bacterium RepID=K1ZJS6_9BACT
peptidase M23 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
peptidase M23
Displaying 24 items

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