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RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_714

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_714_1
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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2..553
DNA (552bp) protein (184aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Sensor protein n=1 Tax=uncultured bacterium RepID=K1Z1D6_9BACT
hypothetical protein
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_714_2
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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595..3297
DNA (2703bp) protein (901aa)
two-component system sensor histidine kinase/response regulator hybrid Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
PAS:Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A-like id=2046705 bin=GWE2_Bacteroidetes_40_15 species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
two-component system sensor histidine kinase/response regulator hybrid
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_714_3
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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3311..5332
DNA (2022bp) protein (674aa)
multi-sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] id=129689 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
multi-sensor signal transduction histidine kinase Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
multi-sensor signal transduction histidine kinase
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_714_4
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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5360..5743
DNA (384bp) protein (128aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V4R9_9AQUI id=67527 bin=ACD48 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
AtoC; response regulator; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
response regulator
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_714_5
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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5813..6181
DNA (369bp) protein (123aa)
Response regulator receiver protein n=1 Tax=uncultured bacterium RepID=K1ZFW5_9BACT
PhoP family transcriptional regulator Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
PhoP family transcriptional regulator
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_714_6
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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6353..7504
DNA (1152bp) protein (384aa)
Phosphoesterase RecJ domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IGC1_9EURY
phosphoesterase RecJ domain-containing protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Exopolyphosphatase-related protein
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_714_7
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(7660..9687)
DNA (2028bp) protein (676aa)
gyrB1; DNA gyrase subunit B (EC:5.99.1.3) Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
gyrB1; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B id=2076614 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_714_8
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(10053..10289)
DNA (237bp) protein (79aa)
HicB family protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DLK6_9GAMM
HicB family protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
HicB
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_714_9
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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10486..11538
DNA (1053bp) protein (351aa)
id=2076611 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=2076611 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_714_10
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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11541..12644
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000365B047
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
rod shape-determining protein RodA
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_714_11
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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12718..13392
DNA (675bp) protein (225aa)
ctc; 50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
50S ribosomal protein L25 id=2076604 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
ctc; 50S ribosomal protein L25/general stress protein Ctc
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_714_12
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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13582..14676
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI0003759553
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
yerB; putative lipoprotein YerB
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_714_13
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(14686..15591)
DNA (906bp) protein (302aa)
protein-(glutamine-N5) methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Release factor glutamine methyltransferase id=2076597 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
protein-(glutamine-N5) methyltransferase
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_714_14
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(15665..16708)
DNA (1044bp) protein (348aa)
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Peptide chain release factor 1 id=2076594 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
peptide chain release factor 1
RIFOXYD12_FULL_OD1_34_57_rifoxyd3_full_scaffold_714_15
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(16833..17195)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000375FE06
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
50S ribosomal protein L31
Displaying 15 items

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