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RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_1
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

2..139
DNA (138bp) protein (46aa)
Exodeoxyribonuclease 7 large subunit Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_2
GWA2_OD1_38_27, Parcubacteria, Bacteria

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132..389
DNA (258bp) protein (86aa)
hypothetical protein Tax=GWA2_OD1_38_27
coiled-coil 35..70 id=7991 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_3
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

624..1253
DNA (630bp) protein (210aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKQ68612.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
sortase family protein id=1264016 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_4
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

1502..3349
DNA (1848bp) protein (616aa)
YD repeat-containing protein n=1 Tax=uncultured bacterium RepID=K2EYZ8_9BACT
PKD domain protein Tax=GWA2_OD1_38_27
peptidase, m36 (fungalysin) family
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_5
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

3555..3791
DNA (237bp) protein (79aa)
hypothetical protein Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_6
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

3742..4845
DNA (1104bp) protein (368aa)
hypothetical protein Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_7
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

5036..5617
DNA (582bp) protein (194aa)
rrmJ; ribosomal RNA large subunit methyltransferase RrmJ (EC:2.1.1.-)
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NFN1_DESTT
RrmJ: ribosomal RNA large subunit methyltransferase J (23S rRNA methylase) Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_8
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

5731..7194
DNA (1464bp) protein (488aa)
lysyl-tRNA synthetase (EC:6.1.1.6)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036EEE74
Lysine--tRNA ligase Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_9
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

7338..8585
DNA (1248bp) protein (416aa)
serS2; serine--tRNA ligase 2 (EC:6.1.1.11)
Serine-tRNA ligase {ECO:0000313|EMBL:KKQ68618.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
Serine--tRNA ligase 2 id=1947684 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_10
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

8582..9343
DNA (762bp) protein (254aa)
Alpha/beta hydrolase family protein Tax=GWA2_OD1_38_27
Possible alpha/beta hydrolase superfamily,slr1916 homolog id=3543946 bin=GWA1_ZB2_49_26 species=Bacillus cellulosilyticus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
alpha/beta hydrolase fold protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_11
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

9487..10953
DNA (1467bp) protein (489aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Tax=GWA2_OD1_38_27
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase id=3543947 bin=GWA1_ZB2_49_26 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
MurF; UDP-N-acetylmuramyl pentapeptide synthase
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_12
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

11061..12326
DNA (1266bp) protein (422aa)
DegT/DnrJ/EryC1/StrS aminotransferase Tax=GWA2_OD1_38_27
DegT/DnrJ/EryC1/StrS aminotransferase id=3543948 bin=GWA1_ZB2_49_26 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
degt/dnrj/eryc1/strs aminotransferase
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_13
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

12333..13355
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037633C1
Methicillin resistance protein Tax=GWA2_OD1_38_27
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_14
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

13391..14188
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000369F1E5
hypothetical protein Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_15
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

14206..14499
DNA (294bp) protein (98aa)
hypothetical protein
hypothetical protein Tax=GWA2_OD1_38_27
Uncharacterized protein id=5098408 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_16
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

14512..15111
DNA (600bp) protein (200aa)
hypothetical protein Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_17

Not on your lists

comp(15218..17017)
DNA (1800bp) protein (600aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036FB2F1
4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:KKQ98719.1}; Flags: Fragment;; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
4-amino-4-deoxy-L-arabinose transferase
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_18
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(17097..18821)
DNA (1725bp) protein (575aa)
Uncharacterized protein Tax=GWA2_OD1_38_27
Uncharacterized protein id=3012778 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_19
unknown

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18987..19196
DNA (210bp) protein (70aa)

This feature has no annotations

RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_20
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

19183..19971
DNA (789bp) protein (263aa)
Transcriptional regulator of heat shock protein n=1 Tax=uncultured bacterium RepID=K2FBV2_9BACT
Heat-inducible transcription repressor hrcA {ECO:0000313|EMBL:KKQ68628.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
hrcA; heat-inducible transcription repressor
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_21
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

19976..20545
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037D9D64
Protein GrpE Tax=GWA2_OD1_38_27
GrpE protein HSP-70 cofactor
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_22
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

20725..22617
DNA (1893bp) protein (631aa)
chaperone protein DnaK (EC:1.3.1.74)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036E23CA
Chaperone protein DnaK Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_23
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

22740..23867
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003769C5D
Chaperone protein DnaJ Tax=GWA2_OD1_38_27
chaperone protein dnaj
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_trna_1
unknown

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24034..24104
DNA (71bp)
transferRNA
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_24
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

24249..25037
DNA (789bp) protein (263aa)
hypothetical protein Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_8999_trna_2
unknown

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25073..25143
DNA (71bp)
transferRNA
Displaying 26 items

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